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GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Ptpn22 and rheumatoid arthritis in Chinchilla lanigera.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with PTPN22 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 398 RGD objects have been annotated to rheumatoid arthritis  (DOID:7148)
  • 2 papers in RGD have been used to annotate Ptpn22
  • Qualifier: susceptibility


    • An association has been curated linking Ptpn22 and rheumatoid arthritis in Chinchilla lanigera.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Automated assignment of GO, PW and RDO ISO annotations across species
  • The annotation has been inferred from sequence orthology with PTPN22 (Homo sapiens)
  • 398 RGD objects have been annotated to rheumatoid arthritis  (DOID:7148)
  • 2 papers in RGD have been used to annotate Ptpn22
  • Qualifier: no_association
  • Curation Notes: DNA:SNP::1858C>T (human)
  • Original References(s): PMID:21467606 REF_RGD_ID:7829746


    • An association has been curated linking Ptpn22 and rheumatoid arthritis in Chinchilla lanigera.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with PTPN22 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 398 RGD objects have been annotated to rheumatoid arthritis  (DOID:7148)
  • 2 papers in RGD have been used to annotate Ptpn22
  • Curation Notes: ClinVar Annotator: match by term: RHEUMATOID ARTHRITIS, SUSCEPTIBILITY TO | ClinVar Annotator: match by term: Rheumatoid arthritis
  • Original References(s): PMID:15004560 PMID:15208781 PMID:15273934 PMID:15580548 PMID:15719322 PMID:15744042 PMID:16273109 PMID:16339849 PMID:16470599 PMID:17170052 PMID:17436241 PMID:17554300 PMID:17878369 PMID:18301444 PMID:18978792 PMID:19265110 PMID:19430480 PMID:19898480 PMID:21841778 PMID:25741868 PMID:28492532


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