Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

9 Annotations Found.

An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Feng Y, etal., J Nutr Biochem. 2013 Jul;24(7):1373-80. doi: 10.1016/j.jnutbio.2012.11.005. Epub 2013 Jan 17.
  • The annotation has been inferred from sequence orthology with Gata4 (Rattus norvegicus) [(IEP) inferred from expression pattern]
  • 15 additional annotations were made from Feng Y, etal., J Nutr Biochem. 2013 Jul;24(7):1373-80. doi: 10.1016/j.jnutbio.2012.11.005. Epub 2013 Jan 17.
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: associated with Vitamin A Deficiency; DNA,mRNA,protein:hypermethylation, decreased expression:heart:


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from Garg V, etal., Nature. 2003 Jul 24;424(6947):443-7. Epub 2003 Jul 6.
  • 2 additional annotations were made from Garg V, etal., Nature. 2003 Jul 24;424(6947):443-7. Epub 2003 Jul 6.
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:10766787 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:20347099 PMID:24000169 PMID:25741868 PMID:30152191


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:8560855 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:18055909 PMID:20981092 PMID:25741868 PMID:27535533 PMID:28492532


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens) & RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens) & RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens) & RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens) & RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens) & RGD:13211495|RGD:13211561|RGD:13211621|RGD:13212058|RGD:13212112|RGD:13212400 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:27426723


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:13211759|RGD:13212522|RGD:13212558|RGD:8696143 (Homo sapiens) & RGD:13211759|RGD:13212522|RGD:13212558|RGD:8696143 (Homo sapiens) & RGD:13211759|RGD:13212522|RGD:13212558|RGD:8696143 (Homo sapiens) & RGD:13211759|RGD:13212522|RGD:13212558|RGD:8696143 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:25741868 PMID:27426723


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:8696144 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:25741868 PMID:27426723 PMID:28492532


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:13211926|RGD:13212134|RGD:13212324 (Homo sapiens) & RGD:13211926|RGD:13212134|RGD:13212324 (Homo sapiens) & RGD:13211926|RGD:13212134|RGD:13212324 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease
  • Original References(s): PMID:27426723 PMID:33116287


    • An association has been curated linking GATA4 and congenital heart disease in Homo sapiens.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred by association of genotype and phenotype with RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens) & RGD:10766779|RGD:10766780|RGD:10766782|RGD:10766785|RGD:10766786|RGD:10766792|RGD:10766793 (Homo sapiens)
  • 1894 RGD objects have been annotated to congenital heart disease  (DOID:1682)
  • 13 papers in RGD have been used to annotate GATA4
  • Curation Notes: ClinVar Annotator: match by term: Congenital heart disease


    • Go Back to source page   Continue to Ontology report