Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking H2-Q4 and uveitis in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Thurau SR, etal., Immunol Lett. 1997 Jun 1;57(1-3):193-201.
  • The annotation has been inferred from sequence orthology with HLA-B (Homo sapiens) [(IDA) inferred from direct assay]
  • 5 additional annotations were made from Thurau SR, etal., Immunol Lett. 1997 Jun 1;57(1-3):193-201.
  • 139 RGD objects have been annotated to uveitis  (DOID:13141)
  • 42 papers in RGD have been used to annotate H2-Q4
  • Qualifier: treatment


    • An association has been curated linking H2-Q4 and uveitis in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Orchard TR, etal., Gastroenterology. 2002 Sep;123(3):714-8.
  • The annotation has been inferred from sequence orthology with HLA-B (Homo sapiens)
  • 13 additional annotations were made from Orchard TR, etal., Gastroenterology. 2002 Sep;123(3):714-8.
  • 139 RGD objects have been annotated to uveitis  (DOID:13141)
  • 42 papers in RGD have been used to annotate H2-Q4
  • Curation Notes: associated with Inflammatory Bowel Diseases; DNA:polymorphisms:cds:HLA-B*27, HLA-B*58 (human)


    • An association has been curated linking H2-Q4 and uveitis in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Kang EH, etal., Hum Immunol. 2013 Oct;74(10):1363-7. doi: 10.1016/j.humimm.2013.06.036. Epub 2013 Jul 2.
  • The annotation has been inferred from sequence orthology with HLA-B (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 4 additional annotations were made from Kang EH, etal., Hum Immunol. 2013 Oct;74(10):1363-7. doi: 10.1016/j.humimm.2013.06.036. Epub 2013 Jul 2.
  • 139 RGD objects have been annotated to uveitis  (DOID:13141)
  • 42 papers in RGD have been used to annotate H2-Q4
  • Qualifier: onset
  • Curation Notes: associated with Behcet Syndrome; DNA:polymorphisms:cds:HLA-B*51 (human)


    • Go Back to source page   Continue to Ontology report