Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Msh2 and urinary bladder cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Myrhoj T, etal., Fam Cancer. 2008 Apr 4;.
  • The annotation has been inferred from sequence orthology with MSH2 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Myrhoj T, etal., Fam Cancer. 2008 Apr 4;.
  • 312 RGD objects have been annotated to urinary bladder cancer  (DOID:11054)
  • 55 papers in RGD have been used to annotate Msh2
  • Curation Notes: DNA:mutation


    • An association has been curated linking Msh2 and urinary bladder cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Mylona E, etal., APMIS. 2008 Jan;116(1):59-65.
  • The annotation has been inferred from sequence orthology with MSH2 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 4 additional annotations were made from Mylona E, etal., APMIS. 2008 Jan;116(1):59-65.
  • 312 RGD objects have been annotated to urinary bladder cancer  (DOID:11054)
  • 55 papers in RGD have been used to annotate Msh2
  • Qualifier: disease_progression
  • Curation Notes: protein:decreased expression:urinary bladder


    • An association has been curated linking Msh2 and urinary bladder cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Joost P, etal., Urology. 2015 Dec;86(6):1212-7. doi: 10.1016/j.urology.2015.08.018. Epub 2015 Sep 15.
  • The annotation has been inferred from sequence orthology with MSH2 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Joost P, etal., Urology. 2015 Dec;86(6):1212-7. doi: 10.1016/j.urology.2015.08.018. Epub 2015 Sep 15.
  • 312 RGD objects have been annotated to urinary bladder cancer  (DOID:11054)
  • 55 papers in RGD have been used to annotate Msh2
  • Curation Notes: DNA:mutations: :multiple


    • An association has been curated linking Msh2 and urinary bladder cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Skeldon SC, etal., Eur Urol. 2013 Feb;63(2):379-85. doi: 10.1016/j.eururo.2012.07.047. Epub 2012 Aug 2.
  • The annotation has been inferred from sequence orthology with MSH2 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Skeldon SC, etal., Eur Urol. 2013 Feb;63(2):379-85. doi: 10.1016/j.eururo.2012.07.047. Epub 2012 Aug 2.
  • 312 RGD objects have been annotated to urinary bladder cancer  (DOID:11054)
  • 55 papers in RGD have been used to annotate Msh2
  • Curation Notes: associated with Lynch syndrome


    • Go Back to source page   Continue to Ontology report