Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

7 Annotations Found.

An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Yoshimoto M, etal., Br J Cancer. 2007 Sep 3;97(5):678-85. Epub 2007 Aug 14.
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 3 additional annotations were made from Yoshimoto M, etal., Br J Cancer. 2007 Sep 3;97(5):678-85. Epub 2007 Aug 14.
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten
  • Qualifier: disease_progression
  • Curation Notes: DNA:deletion


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Anai S, etal., Hum Gene Ther. 2006 Oct;17(10):975-84.
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IMP) inferred from mutant phenotype]
  • 5 additional annotations were made from Anai S, etal., Hum Gene Ther. 2006 Oct;17(10):975-84.
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Hellwinkel OJ, etal., BJU Int. 2008 Jun;101(11):1454-60. Epub 2008 Mar 11.
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IEP) inferred from expression pattern]
  • 20 additional annotations were made from Hellwinkel OJ, etal., BJU Int. 2008 Jun;101(11):1454-60. Epub 2008 Mar 11.
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten
  • Qualifier: disease_progression
  • Curation Notes: mRNA:decreased expression:tumor:lower in high versus low Gleason score tumors (p<0.05 compared to at least one housekeeping gene) (human)


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from RGD automated import pipeline for MGI gene-to-disease annotations
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten
  • Curation Notes: OMIM:176807 | OMIM:300147 | OMIM:300704 | OMIM:601518 | OMIM:602759 | OMIM:608656 | OMIM:608658 | OMIM:609299 | OMIM:609558 | OMIM:610321 | OMIM:610997 | OMIM:611100 | OMIM:611868 | OMIM:611928 | OMIM:611955 | OMIM:611958 | OMIM:611959


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten
  • Curation Notes: ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
  • Original References(s): PMID:10232405 PMID:10353779 PMID:10400993 PMID:10468583 PMID:10749983 PMID:10848731 PMID:10866302 PMID:11684570 PMID:11685670 PMID:14518070 PMID:17392703 PMID:17526800 PMID:17526801 PMID:20301661 PMID:21956414 PMID:22381246 PMID:22595938 PMID:22628360 PMID:23442912 PMID:23470840 PMID:23475934 PMID:23695273 PMID:24033266 PMID:24052722 PMID:24778394 PMID:25157968 PMID:25288137 PMID:25326635 PMID:25549896 PMID:25669429 PMID:25677497 PMID:25741868 PMID:25756585 PMID:27477328 PMID:27959697 PMID:28475857 PMID:28492532 PMID:28526761 PMID:29874181 PMID:30287823 PMID:30614812 PMID:32238909 PMID:33077954 PMID:33600059 PMID:9399897 PMID:9467011


    • An association has been curated linking Pten and prostate cancer in Mus musculus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with PTEN (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 832 RGD objects have been annotated to prostate cancer  (DOID:10283)
  • 127 papers in RGD have been used to annotate Pten
  • Curation Notes: ClinVar Annotator: match by term: Malignant tumor of prostate | ClinVar Annotator: match by term: Prostate cancer
  • Original References(s): PMID:10232405 PMID:10353779 PMID:10400993 PMID:10468583 PMID:10555148 PMID:10749983 PMID:10848731 PMID:10866302 PMID:10923032 PMID:11274365 PMID:11332402 PMID:11504908 PMID:11685670 PMID:11918710 PMID:12372056 PMID:14518070 PMID:16773562 PMID:17286265 PMID:17392703 PMID:17526800 PMID:17526801 PMID:18558293 PMID:18767981 PMID:20085938 PMID:20301661 PMID:21194675 PMID:21343951 PMID:21659347 PMID:21869887 PMID:21956414 PMID:22266152 PMID:22381246 PMID:22595938 PMID:22628360 PMID:22703879 PMID:23161105 PMID:23335809 PMID:23442912 PMID:23470840 PMID:23475934 PMID:23555315 PMID:23695273 PMID:23764071 PMID:23934601 PMID:24033266 PMID:24052722 PMID:24136893 PMID:24345843 PMID:24728327 PMID:24763289 PMID:24778394 PMID:25132236 PMID:25157968 PMID:25186627 PMID:25326635 PMID:25549896 PMID:25669429 PMID:25741868 PMID:25756585 PMID:25980754 PMID:26124082 PMID:26467025 PMID:26580448 PMID:26800850 PMID:26898890 PMID:27428751 PMID:27477328 PMID:27535533 PMID:27959697 PMID:28008555 PMID:28135145 PMID:28418444 PMID:28475857 PMID:28492532 PMID:28526761 PMID:28655553 PMID:29371908 PMID:29594054 PMID:29706350 PMID:29785012 PMID:29874181 PMID:30287823 PMID:30614812 PMID:30659124 PMID:31006514 PMID:31144778 PMID:31159747 PMID:31209962 PMID:31567591 PMID:32238909 PMID:32350270 PMID:32366478 PMID:33077954 PMID:33083010 PMID:33372952 PMID:33471991 PMID:33600059 PMID:33887726 PMID:34268892 PMID:35264596 PMID:35931053 PMID:36988593 PMID:9259288 PMID:9399897 PMID:9467011 PMID:9856571


    • Go Back to source page   Continue to Ontology report