Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Sh2d1a and X-linked lymphoproliferative syndrome 1 in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with SH2D1A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 4 RGD objects have been annotated to X-linked lymphoproliferative syndrome 1  (DOID:0060705)
  • 6 papers in RGD have been used to annotate Sh2d1a


    • An association has been curated linking Sh2d1a and X-linked lymphoproliferative syndrome 1 in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with SH2D1A (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 4 RGD objects have been annotated to X-linked lymphoproliferative syndrome 1  (DOID:0060705)
  • 6 papers in RGD have been used to annotate Sh2d1a
  • Curation Notes: ClinVar Annotator: match by term: Lymphoproliferative syndrome 1, X-linked | ClinVar Annotator: match by term: SH2D1A-related condition
  • Original References(s): PMID:10549287 PMID:10556288 PMID:10598819 PMID:10691868 PMID:10694488 PMID:10898506 PMID:10934222 PMID:11034354 PMID:11049992 PMID:11133747 PMID:11159547 PMID:11414741 PMID:11477068 PMID:11493483 PMID:11520777 PMID:11678908 PMID:12224001 PMID:12356686 PMID:14583885 PMID:15359110 PMID:15632210 PMID:15661030 PMID:15682426 PMID:15711562 PMID:15908972 PMID:15992610 PMID:16199547 PMID:16328363 PMID:16720617 PMID:17576681 PMID:18055393 PMID:19621458 PMID:19937601 PMID:20632414 PMID:20660790 PMID:21119115 PMID:21707584 PMID:21815800 PMID:22493517 PMID:22970278 PMID:23280491 PMID:23829589 PMID:24616127 PMID:24723092 PMID:24923536 PMID:24985396 PMID:25741868 PMID:27209435 PMID:28492532 PMID:28816794 PMID:29604111 PMID:29709555 PMID:30572125 PMID:31415280 PMID:32150605 PMID:32542393 PMID:32888943 PMID:33329693 PMID:3374620 PMID:3658675 PMID:9536098 PMID:9771704 PMID:9811875


    • An association has been curated linking Sh2d1a and X-linked lymphoproliferative syndrome 1 in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated import pipeline for MGI gene-to-disease annotations
  • The annotation has been inferred from sequence or structural similarity with Sh2d1a (Mus musculus) [(IAGP) inferred by association of genotype and phenotype]
  • 4 RGD objects have been annotated to X-linked lymphoproliferative syndrome 1  (DOID:0060705)
  • 6 papers in RGD have been used to annotate Sh2d1a
  • Curation Notes: OMIM:308240


    • Go Back to source page   Continue to Ontology report