Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Birc3 and oral squamous cell carcinoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Cha JD, etal., Head Neck. 2014 Aug;36(8):1168-75. doi: 10.1002/hed.23431. Epub 2014 Jan 16.
  • The annotation has been inferred from sequence orthology with BIRC3 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Cha JD, etal., Head Neck. 2014 Aug;36(8):1168-75. doi: 10.1002/hed.23431. Epub 2014 Jan 16.
  • 100 RGD objects have been annotated to oral squamous cell carcinoma  (DOID:0050866)
  • 52 papers in RGD have been used to annotate Birc3
  • Qualifier: disease_progression
  • Curation Notes: protein:increased expression:oral cavity (human)


    • An association has been curated linking Birc3 and oral squamous cell carcinoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Nagata M, etal., Br J Cancer. 2011 Oct 25;105(9):1322-30. doi: 10.1038/bjc.2011.387. Epub 2011 Sep 27.
  • The annotation has been inferred from sequence orthology with BIRC3 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Nagata M, etal., Br J Cancer. 2011 Oct 25;105(9):1322-30. doi: 10.1038/bjc.2011.387. Epub 2011 Sep 27.
  • 100 RGD objects have been annotated to oral squamous cell carcinoma  (DOID:0050866)
  • 52 papers in RGD have been used to annotate Birc3
  • Qualifier: ameliorates
  • Curation Notes: protein:decreased expression:oral cavity (human)


    • An association has been curated linking Birc3 and oral squamous cell carcinoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Chen YK, etal., Head Neck. 2011 Jul;33(7):985-98. doi: 10.1002/hed.21582. Epub 2010 Oct 21.
  • The annotation has been inferred from sequence orthology with BIRC3 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 11 additional annotations were made from Chen YK, etal., Head Neck. 2011 Jul;33(7):985-98. doi: 10.1002/hed.21582. Epub 2010 Oct 21.
  • 100 RGD objects have been annotated to oral squamous cell carcinoma  (DOID:0050866)
  • 52 papers in RGD have been used to annotate Birc3
  • Curation Notes: protein:increased expression:oral cavity (human)


    • An association has been curated linking Birc3 and oral squamous cell carcinoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Wang L, etal., Oncol Rep. 2018 Mar;39(3):951-966. doi: 10.3892/or.2017.6174. Epub 2017 Dec 28.
  • The annotation has been inferred from sequence orthology with BIRC3 (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Wang L, etal., Oncol Rep. 2018 Mar;39(3):951-966. doi: 10.3892/or.2017.6174. Epub 2017 Dec 28.
  • 100 RGD objects have been annotated to oral squamous cell carcinoma  (DOID:0050866)
  • 52 papers in RGD have been used to annotate Birc3
  • Curation Notes: mRNA:increased expression:oral cavity (human)


    • Go Back to source page   Continue to Ontology report