Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(EXP) inferred from experiment]
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Curation Notes: CTD Direct Evidence: marker/mechanism
  • Original References(s): PMID:21173233


    • An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Cao XX, etal., Ann Hematol. 2017 Nov;96(11):1867-1871. doi: 10.1007/s00277-017-3094-7. Epub 2017 Aug 12.
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Cao XX, etal., Ann Hematol. 2017 Nov;96(11):1867-1871. doi: 10.1007/s00277-017-3094-7. Epub 2017 Aug 12.
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Curation Notes: DNA:mutation:multiple (human)


    • An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Pfeifer M, etal., Leukemia. 2015 Jul;29(7):1578-86. doi: 10.1038/leu.2015.48. Epub 2015 Feb 24.
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(IMP) inferred from mutant phenotype]
  • 5 additional annotations were made from Pfeifer M, etal., Leukemia. 2015 Jul;29(7):1578-86. doi: 10.1038/leu.2015.48. Epub 2015 Feb 24.
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Qualifier: treatment


    • An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Yamada S, etal., Leuk Lymphoma. 2015 Jul;56(7):2141-5. doi: 10.3109/10428194.2014.979413. Epub 2015 Jan 14.
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Yamada S, etal., Leuk Lymphoma. 2015 Jul;56(7):2141-5. doi: 10.3109/10428194.2014.979413. Epub 2015 Jan 14.
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Curation Notes: DNA:missense mutation:multiple, exon 5-6 (human)


    • An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Chen Z, etal., Am J Surg Pathol. 2020 Apr;44(4):444-455. doi: 10.1097/PAS.0000000000001386.
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Chen Z, etal., Am J Surg Pathol. 2020 Apr;44(4):444-455. doi: 10.1097/PAS.0000000000001386.
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Qualifier: severity
  • Curation Notes: DNA:missense mutation:multiple, exon 5 (human)


    • An association has been curated linking Cd79b and diffuse large B-cell lymphoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CD79B (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 74 RGD objects have been annotated to diffuse large B-cell lymphoma  (DOID:0050745)
  • 26 papers in RGD have been used to annotate Cd79b
  • Curation Notes: ClinVar Annotator: match by term: Diffuse large B cell lymphoma
  • Original References(s): PMID:11160144 PMID:31402495


    • Go Back to source page   Continue to Ontology report