Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Cacna1f and congenital stationary night blindness in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Wutz K, etal., Eur J Hum Genet 2002 Aug;10(8):449-56.
  • The annotation has been inferred from sequence orthology with CACNA1F (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Wutz K, etal., Eur J Hum Genet 2002 Aug;10(8):449-56.
  • 29 RGD objects have been annotated to congenital stationary night blindness  (DOID:0050534)
  • 20 papers in RGD have been used to annotate Cacna1f


    • An association has been curated linking Cacna1f and congenital stationary night blindness in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CACNA1F (Homo sapiens) [(EXP) inferred from experiment]
  • 29 RGD objects have been annotated to congenital stationary night blindness  (DOID:0050534)
  • 20 papers in RGD have been used to annotate Cacna1f
  • Curation Notes: CTD Direct Evidence: marker/mechanism


    • An association has been curated linking Cacna1f and congenital stationary night blindness in Rattus norvegicus.        

  • The association was inferred by association of genotype and phenotype (IAGP)
    		•  
  • The annotation was made from Gu Y, etal., Mol Vis. 2008 Jan 9;14:20-8.
  • 13 additional annotations were made from Gu Y, etal., Mol Vis. 2008 Jan 9;14:20-8.
  • 29 RGD objects have been annotated to congenital stationary night blindness  (DOID:0050534)
  • 20 papers in RGD have been used to annotate Cacna1f
  • Curation Notes: DNA:mutation:cds: c.2941C>T (rat)


    • An association has been curated linking Cacna1f and congenital stationary night blindness in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CACNA1F (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 29 RGD objects have been annotated to congenital stationary night blindness  (DOID:0050534)
  • 20 papers in RGD have been used to annotate Cacna1f
  • Curation Notes: ClinVar Annotator: match by term: Congenital stationary night blindness
  • Original References(s): PMID:11281458 PMID:12111638 PMID:17525176 PMID:17949918 PMID:22194652 PMID:24124559 PMID:25307992 PMID:25741868 PMID:26992781 PMID:28041643 PMID:28492532 PMID:30825406 PMID:31456290 PMID:31651202 PMID:9662399 PMID:9662400


    • Go Back to source page   Continue to Ontology report