Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

6 Annotations Found.

An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Karra VK, etal., Indian J Med Res. 2018 Jun;147(6):573-580. doi: 10.4103/ijmr.IJMR_1644_15.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 6 additional annotations were made from Karra VK, etal., Indian J Med Res. 2018 Jun;147(6):573-580. doi: 10.4103/ijmr.IJMR_1644_15.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: susceptibility
  • Curation Notes: DNA:polymorphisms: :HLA-DQA1*0101/2/4, HLA-DQA1*0103 (human)


    • An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Lu LP, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2006 Aug;23(4):427-30.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 5 additional annotations were made from Lu LP, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2006 Aug;23(4):427-30.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: disease_progression
  • Curation Notes: DNA:haplotype::


    • An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Jiang YG, etal., World J Gastroenterol. 2003 Oct;9(10):2221-5.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 3 additional annotations were made from Jiang YG, etal., World J Gastroenterol. 2003 Oct;9(10):2221-5.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: susceptibility
  • Curation Notes: DNA:polymorphism: :


    • An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Li S, etal., PLoS Genet. 2012;8(7):e1002791. doi: 10.1371/journal.pgen.1002791. Epub 2012 Jul 12.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Li S, etal., PLoS Genet. 2012;8(7):e1002791. doi: 10.1371/journal.pgen.1002791. Epub 2012 Jul 12.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: susceptibility


    • An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Guo JC, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2016 May;36(5):539-43.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Guo JC, etal., Zhongguo Zhong Xi Yi Jie He Za Zhi. 2016 May;36(5):539-43.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: treatment
  • Curation Notes: DNA:polymorphisms: :


    • An association has been curated linking RT1-Ba and Chronic Hepatitis B in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Zang GQ, etal., World J Gastroenterol. 2004 Jul 15;10(14):2116-8. doi: 10.3748/wjg.v10.i14.2116.
  • The annotation has been inferred from sequence orthology with HLA-DQA1 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 2 additional annotations were made from Zang GQ, etal., World J Gastroenterol. 2004 Jul 15;10(14):2116-8. doi: 10.3748/wjg.v10.i14.2116.
  • 66 RGD objects have been annotated to Chronic Hepatitis B  (DOID:9008163)
  • 126 papers in RGD have been used to annotate RT1-Ba
  • Qualifier: treatment
  • Curation Notes: DNA:polymorphisms: :HLA-DQA1*0303, HLA-DQA1*0505(human)


    • Go Back to source page   Continue to Ontology report