Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Ontology Browser
Term:
Parent Terms Term With Siblings Child Terms
embryonic tissue +    
entire embryonic mesenchyme +    
mesenchyme +    
trunk +    
1st arch mandibular ectoderm 
1st arch mandibular endoderm +  
1st arch maxillary ectoderm +  
1st arch maxillary endoderm 
anterior axial hypoblast +  
anterior lateral mesoderm 
anterior lateral plate mesoderm +  
anterior neural keel +  
anterior neural rod +  
anterior presumptive neural plate 
associated mesenchyme of foregut-midgut junction 
axial hypoblast +  
body external integument structure +  
body-wall mesenchyme +  
bulbus arteriosus outer layer 
carapacial ridge ectoderm 
carapacial ridge mesenchyme 
cardiac mesenchyme +  
cardiac neural crest +  
cardiogenic splanchnic mesoderm +  
cardiopharyngeal field +  
ceratotrichium +  
cerebellar plate +  
chordo neural hinge 
cranial neural crest +  
dense mesenchyme tissue +  
dorsal axial hypoblast 
dorsal lateral plate region 
dorsal part of pharyngeal pouch 1 
dorsal part of pharyngeal pouch 2 +  
dorsal part of pharyngeal pouch 3 +  
dorsal part of pharyngeal pouch 4 
dorsal part of pharyngeal pouch 5 
ear vesicle +  
early pharyngeal endoderm +  
egg cylinder 
embryonic cloacal epithelium +  
embryonic lymph sac +  
entire pharyngeal arch associated mesenchyme +  
entire pharyngeal arch endoderm +  
enveloping layer of ectoderm +  
epithelium of footplate +  
epithelium of handplate +  
epithelium of otic placode +  
external ectoderm +  
external yolk syncytial layer 
extraembryonic membrane mesenchyme +  
eye primordium +  
falciform fat 
feather bud, dermal component +  
floor plate +  
forebrain neural keel +  
forebrain neural rod +  
forebrain neural tube 
frontonasal process epithelium +  
future central tendon +  
future dermis +  
future falx cerebri +  
future hindbrain meninx +  
germ layer / neural crest +  
germinal neuroepithelium +  
gonad mesenchyme +  
hair of trunk +  
head fold of embryonic disc 
head mesenchyme +  
head somite +  
heart tube +  
hepatic diverticulum +  
hindbrain neural keel +  
hindbrain neural rod +  
hindbrain neural tube 
hindgut +  
inframammary fold 
infundibular recess of 3rd ventricle +  
insect abdominal histoblast anlage +  
insect cephalic furrow 
insect mesoderm anlage +  
insect ventral furrow 
intermammary cleft 
internal yolk syncytial layer 
intramembranous bone +  
intramembranous bone tissue 
jaw mesenchyme +  
kidney field +  
kidney mesenchyme +  
lamina terminalis of neural tube +  
lateral floor plate 
lateral lingual swelling epithelium 
lateral plate mesoderm +  
lateral wall neural rod 
limb mesenchyme +  
line connecting laterally paired nipples 
liver primordium +  
loose mesenchyme tissue +  
lung mesenchyme +  
mammary lobe 
mammary ridge +  
maxillary process ectoderm +  
maxillary process mesenchyme +  
medial floor plate 
median lingual swelling epithelium 
mesenchyme derived from neural crest +  
mesenchyme dorsal fin 
mesenchyme from somatopleure +  
mesenchyme from splanchnopleure +  
mesenchyme median fin fold 
mesenchyme of hindgut 
mesenchyme of hip +  
mesenchyme of main bronchus +  
mesenchyme of mammary gland +  
mesenchyme of shoulder +  
mesenchyme of sublingual gland 
mesenchyme of sublingual gland primordium 
mesenchyme of submandibular gland primordium 
mesenchyme of tongue 
mesenchyme of umbilical cord +  
mesenchyme pectoral fin 
mesenchyme pelvic fin 
mesoderm blood island 
mesonephric mesenchyme +  
metanephric cortex mesenchyme +  
metanephric mesenchyme +  
midbrain neural keel +  
midbrain neural rod 
midbrain neural tube +  
migrating mesenchyme population +  
musculature of trunk +  
nasolacrimal groove +  
nephrogenic mesenchyme +  
nerve of trunk region +  
neural fold +  
neural plate +  
neural tube +  
neural tube basal plate +  
neural tube mantle layer +  
neural tube ventricular layer +  
noninvoluting endocytic marginal cell cluster 
notochordal plate +  
optic eminence mesenchyme 
organizer inducing center 
otic vesicle protrusion +  
paired limb/fin field +  
pancreas mesenchyme 
pancreatic epithelial bud +  
paraxial mesoderm +  
pectoral appendage bud ectoderm +  
pelvic appendage bud ectoderm +  
pericardio-peritoneal canal mesothelium +  
periocular mesenchyme 
pharyngeal arch mesenchyme from head mesenchyme +  
pharyngeal arch mesenchyme from neural crest +  
pharyngeal ectoderm +  
pharyngeal pouch +  
pleuroperitoneal canal 
pleuroperitoneal membrane 
posterior neural keel +  
posterior neural rod +  
posterior presumptive neural plate 
pre-cartilage condensation +  
pre-chordal neural plate +  
presumptive axochord +  
primary heart field +  
primitive olfactory epithelium +  
primitive streak +  
proepicardium +  
prostate field +  
respiratory primordium mesenchyme 
right atrium endocardium +  
roof plate +  
roof plate of diencephalon 
roof plate of medulla oblongata 
roof plate of metencephalon 
roof plate of midbrain 
roof plate of telencephalon 
roof plate spinal cord region 
sacral neural crest 
scleral mesenchyme 
secondary heart field +  
septum transversum +  
sex cord +  
skin of trunk +  
spinal cord neural keel 
spinal cord neural rod 
spinal cord neural tube 
spleen primordium +  
stomodeal ectoderm 
subdivision of trunk +  
submandibular gland primordium epithelium 
tail bud paraxial mesoderm 
tail fold of embryonic disc 
trunk blood vessel +  
trunk connective tissue +  
trunk ganglion +  
trunk mesenchyme +  
Mesenchyme that is part of a developing trunk.
trunk neural crest +  
trunk region element +  
trunk region of vertebral column +  
trunk somite +  
typhlosole 
urethra mesenchymal layer 
urogenital sinus mesenchyme +  
vagal neural crest +  
vasculature of trunk +  
ventral mesenchyme 
ventral part of pharyngeal pouch 1 
ventral part of pharyngeal pouch 2 
ventral part of pharyngeal pouch 3 
ventral part of pharyngeal pouch 4 
ventral part of pharyngeal pouch 5 

Synonyms
Related Synonyms: trunk and cervical mesenchyme
Xrefs: EFO:0003485 ;   EHDAA2:0002092 ;   EHDAA:377 ;   EMAPA:16177 ;   TAO:0000081 ;   VHOG:0000281 ;   ZFA:0000081
Definition Sources: OBOL:automatic

paths to the root