Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
Ontology Browser
Term:
forebrain-midbrain boundary
(UBERON:0005075)
Annotations:
Rat: (0)
Mouse: (0)
Human: (0)
Chinchilla: (0)
Bonobo: (0)
Dog: (0)
Squirrel: (0)
Pig: (0)
Naked Mole-rat: (0)
Green Monkey: (0)
Parent Terms
Term With Siblings
Child Terms
anatomical junction
+
brain
+
ectoderm-derived structure
+
presumptive forebrain midbrain boundary
+
abducens nerve
acinus of lacrimal gland
acinus of lactiferous gland
+
acinus of olfactory gland
acinus of sebaceous gland
+
actinotrichium
+
adenohypophysis
+
afterfeather
aggregate regional part of brain
+
ala of nose
alar plate midbrain
ampullary nerve
ampullary organ
anal canal
+
anal column
anterior dentation of pectoral fin spine
anterior distal serration of pectoral fin spine
anterior ectodermal midgut
anterior lamina recurvata
anterior maxillary process
anterior nasal wall
anterior neural keel
+
anterior neural rod
+
anterior presumptive neural plate
anterior ramus of cleithrum
anterior segment of eyeball
+
anterior uvea
+
anterolateral process of frontoparietal
anteroventral process of cleithrum
anus
apex of cochlea
aqueous drainage system
+
aqueous vein
areola
+
areolar tubercle
arrector pili muscle of vibrissa
arthropod optic lobe
ascending process of the parasphenoid
atrioventricular region
+
base of cochlear canal
basilar membrane of cochlea
+
basilar papilla
basipterygoid process of parasphenoid
basis modioli
basivertebral vein
blood-cerebrospinal fluid barrier
blood-inner ear barrier
bony labyrinth
+
border between sublaminar layers
+
brain
+
brain blood vessel
+
brain endothelium
brain gray matter
+
brain marginal zone
+
brain meninx
+
brain ventricle/choroid plexus
+
brain white matter
+
bronchoalveolar duct junction
bulb of hair follicle
+
calcareous tooth
+
calcified structure of brain
+
camera-type eye
+
canal of Schlemm
canthus
+
capsular process
capsule of lens
cardiac neural crest
+
cartilage of external acoustic meatus
cartilaginous external acoustic tube
caudal mesencephalo-cerebellar tract
central canal of spinal cord
+
central figure of scute
central nervous system
+
central nervous system cell part cluster
+
central retina
cephalopod optic lobe
cerebellar crest
cerebral hemisphere
+
cerebral subcortex
+
chamber of eyeball
+
chitin-based cuticle
+
chorioretinal region
+
choroid plexus stroma
+
ciliary body
+
ciliary marginal zone
ciliary processes
ciliary stroma
circuit part of central nervous system
+
cleithrum head
climbing fiber
cochlea
+
cochlear basement membrane
cochlear canal
+
cochlear duct of membranous labyrinth
+
cochlear labyrinth
+
cochlear modiolus
+
cochlear nerve
collagenous dermal stroma
columella nasi
common crus of semicircular duct
composite part spanning multiple base regional parts of brain
+
conjunctiva
+
conjunctival papilla
conjunctival sac
+
corneo-scleral junction
corpora quadrigemina
+
cortex of hair
courtship gland
cranial neural crest
+
crista ampullaris
+
crista intermedia
crista subnasalis
crista supraorbitalis
crus commune
+
ctenius
cultriform process
cusp of tooth
+
cutaneous elastic tissue
+
cutaneous microfibril
cuticle of hair
dartos muscle of labia majora
dentate gyrus subgranular zone
dermal condensation of feather follicle
+
dermal papilla
+
dermal pulp of feather shaft
dermal scale focus
dermal skeletal element
+
dermal superficial region
dermis
+
dermis of feather follicle
diaphragma sellae
diencephalic part of interventricular foramen
digestive tract junction
+
distal limb integumentary appendage
+
dorsal iris
dorsal part of optic cup
dorsal zone of medial entorhinal cortex
dorso-rostral cluster
dorsolateral septum
dorsum of nose
duct of apocrine sweat gland
duct of eccrine sweat gland
duct of olfactory gland
duct of sebaceous gland
+
ductus reuniens
+
dura mater lymph vessel
ecto-epithelium
+
ectodermal part of digestive tract
+
Eimer's organ
elastica externa of notochord
enamel knot
endolymphatic duct
+
endolymphatic system
entorhinal cortex
+
epibranchial ganglion
+
epidermal egg tooth
epidermal intermediate stratum
epidermal placode
epidermal ridge of digit
epidermal scale
+
epidermal superficial stratum
epidermal-dermal junction
+
epidermis of feather follicle
+
epidermis suprabasal layer
epioccipital bridge
epioccipital posterior process
epiotic
+
epiphysial cluster
external acoustic meatus
+
external acoustic meatus osseus part
external cellular layer
external naris
+
external nose
+
extremitas anterior
eye muscle
+
eye trabecular meshwork
+
eyeball of camera-type eye
+
eyelid
+
eyelid blood vessel
eyelid gland
+
falx cerebelli
falx cerebri
fasciculus of brain
+
fasciola cinerea
fasciolar gyrus
feather
+
feather barb
+
feather barbicel
feather barbule
+
feather bud, dermal component
+
feather calamus
feather shaft
+
feather vane
filum terminale
+
filum terminale externum
filum terminale internum
fin fold pectoral fin bud
+
fin hook
+
flexural organ
floor plate
+
floor plate of neural tube
+
foramen cecum of frontal bone
forebrain midbrain boundary neural keel
+
forebrain midbrain boundary neural plate
+
forebrain midbrain boundary neural rod
+
forebrain midbrain boundary neural tube
forebrain neural keel
+
forebrain neural rod
+
forebrain neural tube
forebrain-midbrain boundary
An anatomical boundary that adjacent_to a forebrain and adjacent_to a midbrain.
foregut duodenum mesentery
fourth ventricle aperture
+
fovea centralis
+
foveola of retina
frontal nerve (branch of ophthalmic)
future hindbrain meninx
+
ganglion of central nervous system
+
gelatinous layer of statoconial membrane
gigantocellular part of magnocellular preoptic nucleus
gingival epithelial attachment
gland of anal canal
gland of diencephalon
+
gland of nasal mucosa
+
gluteal sulcus
granular layer corpus cerebelli
granular layer valvula cerebelli
gyrus
+
hair canal
hair matrix
hair medulla
hair root
hair root sheath
+
hair root sheath matrix
hair shaft
+
Harderian gland
+
Harderian gland duct
head taste bud
helicotrema
Henle's fiber layer
Hensen stripe
hindbrain neural keel
+
hindbrain neural rod
+
hindbrain neural tube
hindbrain venous system
hindbrain-spinal cord boundary
hoof lamina
hyoid articular area
hypocleideum
immature otolith
+
inferior branch of oculomotor nerve
inferior horn of the lateral ventricle
inferior parietal cortex
inferior rectal artery
infundibular organ
infundibulum of hair follicle
inner ear foramen
+
insect abdominal histoblast anlage
+
insect adult brain
+
insect analia
+
insect antennal disc
+
insect anterior ectoderm derivative
+
insect arista
+
insect Bolwig organ
insect clypeo-labral disc
+
insect clypeus
insect cuticular specialization
+
insect dorsal ectoderm derivative
+
insect dorsal mesothorax
+
insect dorsal thoracic disc
+
insect embryonic brain
+
insect embryonic/larval brain
+
insect eye-antennal disc
+
insect genital disc
+
insect labial disc
+
insect mesothoracic tergum
insect presumptive arista
+
insect presumptive prothoracic metatarsus
+
insect proboscis
insect prothoracic leg
+
insect prothoracic tarsal segment
+
insect protocerebrum
+
insect stomatogastric nervous system
insect supraesophageal ganglion
+
insect ventral ectoderm derivative
+
insect ventral thoracic disc
+
internal acoustic meatus
internal cellular layer
internal ear
+
internal surface of frontal bone
interventricular foramen of CNS
+
intervertebral vein
iris
+
iris stroma
isthmus of cingulate gyrus
kidney corticomedullary boundary
Kimura membrane
labyrinthine artery
lacrimal apparatus
+
lacrimal canaliculus
+
lacrimal drainage system
+
lacrimal gland
+
lacrimal lake
lacrimal nerve
lacrimal papilla
lacrimal punctum
lacrimal sac
+
lamina inferior
lamina nariochoanalis
lamina of spiral limbus
lamina precerebralis
lamina superior
lateral eminence of fourth ventricle
lateral eminence of hypophysis
lateral entorhinal cortex
lateral floor plate
lateral line
+
lateral line ganglion
+
lateral line nerve
+
lateral ventricle subependymal layer
lateral wall neural rod
lateral zone of hypothalamus
+
layer of dura mater
+
layer of hippocampal field
+
layer of retina
+
lens cortex
lens fiber
lens nucleus
lens of camera-type eye
+
lens vesicle
+
lepidotrichial segment
+
limbic system
+
limiting layer of elasmoid scale
lobe of cerebral hemisphere
+
lobule of mammary gland
+
long ciliary nerve
lunule of nail
macula
+
macula lutea
+
macula lutea proper
mammary gland
+
mammary gland alveolus
mammary gland connective tissue
+
mammary gland luminal epithelium
mammary gland smooth muscle
mammary lobe
mammillary body
+
mandibular arch neural crest
margin of eyelid
margo anterior of cleithrum
margo posterior of cleithrum
margo scapularis
margo vertebralis
medial entorhinal cortex
+
medial floor plate
medial zone of hypothalamus
+
median pars intermedia
median prenasal process
medulla oblongata
+
membranous labyrinth
+
meninx
+
mesenchyme of mammary gland
+
mesenchyme of nasal septum
midbrain hindbrain boundary neural keel
+
midbrain hindbrain boundary neural rod
+
midbrain hindbrain boundary neural tube
midbrain neural keel
+
midbrain neural rod
midbrain neural tube
+
midbrain-hindbrain boundary
+
midgut duodenum mesentery
+
mixed ectoderm/mesoderm/endoderm-derived structure
mole
molecular layer corpus cerebelli
+
molecular layer valvula cerebelli
+
mossy fiber
mouth-foregut junction
+
mucosa of anal canal
mucosa of lacrimal canaliculus
mucosa of nasal septum
mucosa of nasolacrimal duct
+
muscle layer of anal canal
mushroom body
nail matrix
nail plate
nasal bridge
nasal cartilage
+
nasal cavity mucosa
+
nasal muscle
+
nasal septum
+
nasal skeleton
+
nasal tentacle
nasociliary nerve
nasolabial region
nasolacrimal duct
+
neck of tooth
nerve plexus
+
neural crest
+
neural crest-derived structure
+
neural tube basal plate
+
neural tube derived brain
neural tube lateral wall
+
neural tube marginal layer
+
neuraxis flexure
+
neurectoderm
+
neurogenic field
+
neuromast
+
neuromere
+
neuropore
+
nipple
+
non-neural ectoderm
+
nose
+
nose anterior margin
nose vertex
notochord
+
notochord posterior region
notochordal canal
nucleus pulposus
nuptial pad
ocular fundus
ocular surface region
+
oculomotor nerve
olfactory apparatus chamber
+
olfactory nerve
olivary body
+
opercular part of inferior frontal gyrus
ophthalmic nerve
+
opisthotic
optic cup
+
optic disc
optic vesicle
+
ora serrata of retina
orbital part of frontal bone
oronasal membrane
osseus cochlea
+
osseus cochlear canal
osseus labyrinth vestibule
+
osseus semicircular canal
osseus spiral lamina
otic capsule
+
otic vesicle protrusion
+
otolith
+
otolith organ
+
otolithic part of statoconial membrane
+
outer root sheath companion layer
Pacinian corpuscle
palpebral fissure
papillary layer of dermis
+
parafoveal part of retina
parapineal organ
parasagittal crest
parasphenoid flange
parenchyma of central nervous system
+
parenchyma of mammary gland
parietal organ
pars amphibiorum
pars basilaris
pars inferior of labyrinth
pars intercerebralis
pars intermedia of adenohypophysis
pars plana of ciliary body
pars plicata of ciliary body
pars tuberalis of adenohypophysis
pectinate line
pectoral fin fold
perichordal ring
perichordal tissue
+
perifoveal part of retina
perilymphatic channel
+
periocular mesenchyme
peripheral region of retina
periventricular zone of hypothalamus
+
pillar of the semicircular canal
+
pineal foramen
piriform aperture
pit organ
placodal ectoderm
planum terminale
planum triangulare
plica semilunaris of conjunctiva
podotheca
pole of lens
+
pontine tegmentum
+
postbranchial lamina
posterior cleithral process
posterior dentation of dorsal fin spine 2
posterior dentation of pectoral fin spine
posterior lamina recurvata
posterior lateral line primordium
+
posterior maxillary process
+
posterior maxillary process dorsal process
posterior neural keel
+
posterior neural rod
+
posterior presumptive neural plate
posterior ramus of cleithrum
posterior segment of eyeball
+
postnasal wall
postorbital process
pre-Botzinger complex
pre-chordal neural plate
+
presubiculum
+
primary choana
primary nerve cord
+
primary olfactory fiber layer
primary vitreous
primitive superior sagittal sinus
+
processus lingularis of nasal skeleton
processus posterior of parasphenoid
procurrent spur
prootic bone
+
pupillary membrane
Purkinje cell layer corpus cerebelli
Purkinje cell layer valvula cerebelli
ramules cutaneous
ramus anterior of CN VIII
ramus nasalis lateralis
ramus nasalis medialis
ramus of feather barb
ramus of feather barbule
ramus posterior of CN VIII
recessus basilaris
recessus fenestrae ovalis
regional part of brain
+
regional part of spinal cord
+
Reissner's fiber
+
remnant of Rathke's pouch
reticular layer of dermis
reticular membrane of spiral organ
retina
+
retrochiasmatic area
rhamphotheca
+
rhinarium
rhombomere boundary
ridge of tooth
+
roof plate
+
roof plate of diencephalon
roof plate of medulla oblongata
roof plate of metencephalon
roof plate of midbrain
roof plate of telencephalon
roof plate spinal cord region
root of nail
saccule duct
saccus dorsalis
sacral neural crest
sallet
scale primordium
segmental subdivision of hindbrain
+
semicircular canal
+
semicircular canal ampulla
+
semicircular duct
+
sensory dissociation area
septal olfactory organ
+
septum pellucidum
+
septum semicircularium anterior
septum semicircularium laterale
septum semircularium posterior
seydels palatal process
sinotubular junction
skeletal muscle tissue of eye
+
skeletal support for eminentia olfactoria
+
skin appendage follicle
+
skin crease
+
skin gland
+
skin of body
+
smooth muscle of eye
+
solum nasi
somite border
+
spatium sacculare
spina acromioidea
spinal cord
+
spinal cord neural keel
spinal cord neural rod
spinal cord neural tube
spiral ligament
spiral modiolar artery
spiral organ of cochlea
+
spiral prominence of cochlear duct
statoconial membrane
+
strand of hair
+
stratum basale of epidermis
+
stratum compactum of dermis
+
stratum corneum of epidermis
+
stratum fibrosum et griseum superficiale
stratum granulosum of epidermis
stratum intermedium of epidermis
stratum intermedium of tooth
stratum lucidum of epidermis
stratum marginale
stratum opticum
stratum periventriculare
stratum spinosum of epidermis
stria vascularis of cochlear duct
+
stylar shelf
+
subarachnoid space of brain
+
subcupular meshwork of statoconial membrane
subdivision of conjunctiva
+
subdivision of spinal cord central canal
+
submucosa of anal canal
subolfactory process
subotic alae
substantia nigra pars compacta
substantia nigra pars reticulata
substratum of layer of retina
+
sulcus of brain
+
supcapsular region of anterior region of lens
supcapsular region of posterior region of lens
superior branch of oculomotor nerve
superior parietal cortex
supraorbital flange
supraorbital foramen
+
suspensory ligament of breast
suspensory ligament of lens
tapetum lucidum of camera-type eye
+
tectorial membrane of cochlea
+
tectorial restraint system
tectum nasi
tela choroidea of fourth ventricle
tela choroidea of midbrain cerebral aqueduct
tela choroidea of telencephalic ventricle
tela choroidea of third ventricle
telencephalic part of interventricular foramen
telencephalon diencephalon boundary
tentorium cerebelli
terminal part of the cochlear canal
thymus corticomedullary boundary
tooth crown
+
tooth enamel organ
+
tooth root
+
tract of brain
+
transverse nasal root vein
triangular part of inferior frontal gyrus
trunk neural crest
+
trunk taste bud
tunica fibrosa of eyeball
+
type 1 odontode
unencapsulated tactile receptor
upper eyelid protuberances
ureteropelvic junction
ureterovesical junction
+
urohyal lateral process
urohyal median process
urophysis
utricle duct
utricle valve
utriculosaccular duct
+
uvea
+
vacuolated notochordal tissue
vagal neural crest
+
vallecula of cerebellum
vasculature of brain
+
venous dural sinus
+
venous system of brain
ventral limb of posttemporal
ventral part of optic cup
+
ventricular system of brain
+
ventricular system of central nervous system
+
ventricular zone
Verson's gland
vestibular aqueduct
vestibular fissure of the cochlear canal
vestibular labyrinth
+
vestibular membrane of cochlear duct
vestibular nerve
vestibulocochlear nerve
+
vitreous body
+
vomeronasal nerve
vomeronasal organ
+
wall of anal canal
wall of central canal of spinal cord
wall of eyeball
wall of lacrimal duct
wall of membranous labyrinth
wall of ventricular system of brain
+
zona limitans intrathalamica
zone of basilar membrane of cochlea
+
zone of skin
+
zygomatic process of frontal bone
Synonyms
Exact Synonyms:
diencephalic-mesencephalic boundary ; forebrain-midbrain boundary region
Xrefs:
EMAPA:36449 ; TAO:0001367 ; ZFA:0001367
axiom_lost:
relationship loss: develops_from forebrain midbrain boundary neural tube (TAO:0007040)[TAO]" xsd:string {date_retrieved="2012-08-14", external_class="TAO:0001367", ontology="TAO
Definition Sources:
OBOL:automatic