frameshift_variant - Ontology Browser - Rat Genome Database

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Ontology Browser

frameshift_variant (SO:0001589)
Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: (0)

Parent Terms

Term With Siblings

Child Terms

protein altering variant + is-a

is-a

frameshift variant +

A sequence variant which causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.

inframe variant +

is-a

frame restoring variant

is-a

frameshift elongation

is-a

frameshift truncation

is-a

frameshift variant NMD escaping

is-a

frameshift variant NMD triggering

is-a

minus 1 frameshift variant

is-a

minus 2 frameshift variant

is-a

plus 1 frameshift variant

is-a

plus 2 frameshift variant

Synonyms
Exact Synonyms:	Jannovar:frameshift_variant ; Seattleseq:frameshift ; VAAST:frameshift_variant ; VEP:frameshift_variant ; frameshift variant ; frameshift_ ; frameshift_coding ; snpEff:FRAME_SHIFT
Narrow Synonyms:	VAT:deletionFS ; VAT:insertionFS
Related Synonyms:	ANNOVAR:frameshift block substitution ; ANNOVAR:frameshift substitution ; Seattleseq:frameshift-near-splice
Xrefs:	http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq" ; http://snpeff.sourceforge.net/SnpEff_manual.html ; http://vat.gersteinlab.org/formats.php "VAT" ; http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences ; loinc:LA6694-9 "Frameshift"
Definition Sources:	SO:ke

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