initiator_codon_variant - Ontology Browser - Rat Genome Database

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Ontology Browser

initiator_codon_variant (SO:0001582)
Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: (0)

Parent Terms

Term With Siblings

Child Terms

coding sequence variant + is-a

is-a

initiator codon variant +

A codon variant that changes at least one base of the first codon of a transcript.

protein altering variant +

synonymous variant +

terminator codon variant +

is-a

is-a

start retained variant

Synonyms
Exact Synonyms:	Jannovar:initiator_codon_variant ; VAT:startOverlap ; initiatior codon variant ; initiator codon change
Related Synonyms:	snpEff:NON_SYNONYMOUS_START
Xrefs:	EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html ; http://snpeff.sourceforge.net/SnpEff_manual.html ; http://vat.gersteinlab.org/formats.php "VAT" ; loinc:LA6695-6 "Initiating Methionine"
Definition Sources:	SO:ke

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