complex_transcript_variant - Ontology Browser

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complex_transcript_variant (SO:0001577)
Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: (0)

Parent Terms

Term With Siblings

Child Terms

transcript variant + is-a

coding transcript variant +

complex transcript variant

A transcript variant with a complex INDEL- Insertion or deletion that spans an exon/intron border or a coding sequence/UTR border.

exon variant +

incomplete transcript variant +

intragenic variant

intron variant +

NMD transcript variant

non coding transcript variant +

partially duplicated transcript +

splicing variant +

transcript secondary structure variant +

Synonyms
Exact Synonyms:	complex change in transcript ; complex transcript variant ; complex_indel
Related Synonyms:	Seattleseq:codingComplex ; Seattleseq:codingComplex-near-splice
Xrefs:	http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq"
Definition Sources:	http://ensembl.org/info/docs/variation/index.html

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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