CAAT_signal - Ontology Browser - Rat Genome Database

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Ontology Browser

CAAT_signal (SO:0000172)
Annotations: Rat: (0) Mouse: (0) Human: (0) Chinchilla: (0) Bonobo: (0) Dog: (0) Squirrel: (0) Pig: (0)

Parent Terms

Term With Siblings

Child Terms

DNA motif + is-a

RNApol II promoter + part-of

androgen response element

ARS consensus sequence

CAAT signal

Part of a conserved sequence located about 75-bp upstream of the start point of eukaryotic transcription units which may be involved in RNA polymerase binding; consensus=GG(C|T)CAATCT.

cis acting homologous chromosome pairing region

DCE SI

DCE SII

DCE SIII

DMv1 motif

DMv2 motif

DMv3 motif

DMv5 motif

DPE1 motif

DRE motif

DSR motif

E box motif

GAGA motif

GC rich promoter region

INR1 motif

mating type region motif +

mating type region replication fork barrier

minus 10 signal

minus 12 signal

minus 24 signal

minus 35 signal

NDM2 motif

NDM3 motif

octamer motif

promoter element +

PSE motif

rDNA intergenic spacer element

rDNA replication fork barrier

RNApol II core promoter +

Sap1 recognition motif

teb1 recognition motif

Zas1 recognition motif

Synonyms
Exact Synonyms:	CAAT box ; CAAT signal ; INSDC_qualifier:CAAT_signal
Broad Synonyms:	INSDC_feature:regulatory
Xrefs:	http://en.wikipedia.org/wiki/CAAT_box "wiki"
Definition Sources:	http://www.insdc.org/files/feature_table.html

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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