Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

Ontology Browser

Term:
Parent Terms Term With Siblings Child Terms
1,3-benzoxazoles +     
Cy3 dye +    
fluorochrome +   
(CS)2Ir(mu-Cl)2Ir(CS)2 
1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloroimidacarbocyanine +  
1,1',3,3'-tetraethyl-5,5',6,6'-tetrachloroimidacarbocyanine iodide 
1,3-benzoxazole +  
1,3-dichloro-7-hydroxy-9,9-dimethyl-9H-acridin-2-one 
1,4-diphenylbutadiene 
1,4-diphenylbutadiyne 
1,6-diphenylhexatriene 
1-(4-chlorophenyl)-3-[3-(5-methyl-1,3-benzoxazol-2-yl)phenyl]thiourea 
2',4',5',7'-tetrabromo-2,3,4,5-tetrachlorofluorescein 
2',4',5',7'-tetrabromofluorescein(2-) +  
2',7'-bis-(2-carboxyethyl)-5-carboxyfluorescein 
2',7'-bis-(2-carboxyethyl)-6-carboxyfluorescein 
2',7'-bis-(2-carboxyethyl)carboxyfluorescein +   
2',7'-dichlorofluorescein 
2',7'-difluorofluorescein 
2',7'-difluorofluorescein DHPE 
2'-(4-ethoxyphenyl)-5-(4-methylpiperazin-1-yl)-2,5'-bibenzimidazole  
2,7-dibromo-4-hydroxymercurifluorescein 
2-(2-amino-4H-[1,3,5]triazino[2,1-b][1,3]benzoxazol-4-yl)propanedioic acid diethyl ester 
2-(3,4-dichlorophenyl)-2,3-dihydro-1,3-benzoxazole 
2-(5'-chloro-2'-phosphoryloxyphenyl)-6-chloro-4-(3H)-quinazolinone 
2-[4-(dimethylamino)styryl]-1-methylpyridinium +  
2-[4-(dimethylamino)styryl]-1-methylpyridinium iodide 
2-dodecylresorufin 
2-methylbenzoxazole 
3,3'-dipentyloxacarbocyanine 
3,7-diamino-5-phenylphenazin-5-ium +  
3-(5-chlorobenzoxazol-2-yl)-7-diethylaminocoumarin 
3-(benzothiazol-2-yl)-7-(diethylamino)-2-oxo-2H-1-benzopyran-4-carbonitrile 
4,4'-bis(\{4-anilino-6-[bis(2-hydroxyethyl)amino]-1,3,5-triazin-2-yl\}amino)stilbene-2,2'-disulfonic acid 
4-(4-diethylaminostyryl)-1-methylpyridinium +  
4-(4-diethylaminostyryl)-1-methylpyridinium iodide 
4-(4-dihexadecylaminostyryl)-N-methylpyridium +  
4-(4-dihexadecylaminostyryl)-N-methylpyridium iodide 
4-(dicyanomethylene)-2-methyl-6-(4-(dimethylamino)styryl)-4H-pyran 
4-[4-(dimethylamino)styryl]-N-methylpyridinium iodide 
4-chloro-7-nitrobenzofurazan 
4-dimethylamino-4'-nitrostilbene 
5(6)-carboxy-2',7'-dichlorofluorescein  
5-(N-hexadecanoyl)aminofluorescin 
5-carboxy-X-rhodamine +  
5-carboxy-X-rhodamine triethylammonium salt 
5-carboxyfluorescein +   
5-carboxynaphthofluorescein 
5-carboxytetramethylrhodamine 
5-chloromethylfluorescein diacetate  
6,8-difluoro-7-hydroxy-4-methylcoumarin +  
6-carboxy-2',4,4',5'7,7'-hexachlorofluorescein succinimidyl ester 
6-carboxy-2',4,7,7'-tetrachlorofluorescein succinimiyl ester 
6-carboxy-4',5'-dichloro-2',7'-dimethoxyfluorescein 
6-carboxyfluorescein succinimidyl ester 
6-carboxynaphthofluorescein 
6-carboxyrhodamine 6G 
6-chloro-3-(hydroxymethyl)benzoxazolin-2-one 
7-amino-4-(trifluoromethyl)coumarin +  
7-aminoactinomycin D 
7-benzylamino-4-nitrobenz-2-oxa-1,3-diazole 
7-methoxycoumarin-4-acetic acid 
7-nitrobenzoxadiazole-6-aminohexanoic acid 
8-benzyloxy-5,7-diphenylquinoline 
9,10-bis(phenylethynyl)anthracene 
9,10-diphenylanthracene 
acridine orange  
acridine orange cation +   
acridine orange free base  
acridine yellow 
acridine yellow cation +  
adams apple red 680 
adirondack green 520 
alcian yellow 
alcian yellow cation +  
Alexa Fluor 350 
Alexa Fluor 405 
Alexa Fluor 430 
Alexa Fluor 430(1-) +  
Alexa Fluor 480 
Alexa Fluor 480(3-) +  
Alexa Fluor 488 +  
Alexa Fluor 488 meta-isomer(2-) +  
Alexa Fluor 488 para-isomer 
Alexa Fluor 488 para-isomer(2-) +  
Alexa Fluor 514 +  
Alexa Fluor 514 meta-isomer 
Alexa Fluor 514 para-isomer 
Alexa Fluor 532 
Alexa Fluor 546 
Alexa Fluor 555 
Alexa Fluor 568 +  
Alexa Fluor 594 +  
Alexa Fluor 610-X 
Alexa Fluor 610-X(2-) +  
alizarin cyanin BBS 
alkali blue 4B 
alkali Blue G 
aluminon 
aniline blue WS 
ATTO 425-2 +  
ATTO 465-2 +  
ATTO 465-2(1+) +  
ATTO 495-2(1+) +  
ATTO 520-2 +  
ATTO 520-2(1+) +  
ATTO 565 +  
ATTO 565 meta-isomer 
ATTO 565 meta-isomer(1+) +  
ATTO 565 para-isomer(1+) +  
ATTO 590 +  
ATTO 590 meta-isomer(1+) +  
ATTO 590 para-isomer 
ATTO 590 para-isomer(1+) +  
ATTO 610-2 +  
ATTO 610-2(1+) +  
ATTO 635-2 +  
ATTO 635-2(1+) +  
auramine O 
auramine O free base 
aurintricarboxylic acid  
azure A 
azure B  
azure C 
azurite 
basic brown 1 +  
basic fuchsin 
benoxaprofen  
biphenylacetylene 
birch yellow 580 
Bismark brown Y 
BoBo-1 
BoBo-1(4+) +  
BoBo-3 
BoBo-3(4+) +  
BODIPY 630/650-X 
BODIPY 650/665-X 
BODIPY FL 
BODIPY FL-X 
BODIPY R6G 
BODIPY TMR-X 
BODIPY TR methyl ester 
BODIPY TR-X 
BODIPY TR-X phallacidin 
BODIPY-3823 
brilliant cresyl blue 
brilliant green  
brilliant green cation +   
C3-indocyanine 
C3-indocyanine cation +  
C3-oxacyanine 
C3-oxacyanine cation +  
C3-thiacarbocyanine 
C3-thiacarbocyanine cation +   
C5-indocyanine 
C5-indocyanine cation +  
C5-oxacyanine 
C5-oxacyanine cation +  
C545T 
C7-indocyanine +  
C7-indocyanine cation +  
C7-oxacyanine 
C7-oxacyanine cation +  
calcein +   
calcein am  
calcein red-orange 
calcium crimson 
calcium green 1 
calcium green 1(6-) +  
calcium orange 
carbocyanin DBTC 
carbocyanin DBTC(1+) +  
carboxynaphthofluorescein +  
cascade blue  
cascade yellow 
catskill green 540 
CBQCA reagent 
Celestin blue B 
CellTracker red CMTPX +  
CellTracker red CMTPX 5-isomer 
CellTracker red CMTPX 6-isomer 
cellTracker violet BMQC 
chlorzoxazone  
CHOxAsH-bis(1,2-ethanedithiol) 
Chrome fast yellow 8GL 
Chrome fast yellow 8GL (acid form) 
chrome violet CG 
chromoxane cyanin R 
Congo corinth 
Congo corinth (acid form) 
coumarin 120 
coumarin 152 
coumarin 153 
coumarin 30 
coumarin 343 
coumarin 460  
coumarin 480 +  
coumarin 481 
coumarin 500 
coumarin 504 
coumarin 6 
cresyl violet +  
cresyl violet perchlorate 
cryptocyanin 
cryptocyanin cation +  
Cy2 dye 
Cy3-bifunctional dye zwitterion 
Cy3-bifunctional dye(1-) 
Cy3-monofunctional dye(1-) 
Cy3.5 dye 
Cy3B dye NHS ester 
Cy5.5 dye 
Cy7 dye 
CypHer5 
dabcyl SE dye 
DAF-FM dye 
DAPI  
dapoxyl (2-aminoethyl)sulfonamide +  
di-8-ANEPPS dye 
dibromobimane 
dieuropium trioxide nanoparticle 
diIC18(7) dye 
diIC18(7)(1+) +  
dilC18(3) dye 
dilC18(3)(1+) +  
dilC18(5) dye 
dilC18(5)(1+) +  
diOC18(3) dye 
diOC18(3)(1+) +  
The cationic form of a C3 cyanine dye having 3-octadecyl-1,3-benzoxazol-2(3H)-yl units at each end.
dithiazanine +   
dithiazanine iodide 
DND-153 dye 
DND-160 dye 
DND-167 dye 
DND-192 dye 
DND-22 dye 
DND-26 dye 
DND-99 dye 
DRAQ5 dye 
Durazol blue 4R 
Durazol blue 4R (acid form) 
DY-480XL 
DY-485XL 
DY-520XL 
DY-615 
DY-630 
DY-631 
DY-631(1-) +  
DY-632 
DY-633 
DY-633(1-) +  
DY-634 
DY-635 
DY-636 
DY-636(1-) +  
DY-650 
DY-651 
DY-651(1-) +  
DY-652 
DY-675 
DY-676 
DY-676(1-) +  
DY-677 
DY-678 
DY-680 
DY-681 
DY-681(1-) +  
DY-682 
DY-700 
DY-701 
DY-701(1-) +  
DY-730 
DY-731 
DY-731(1-) +  
DY-732 
DY-734 
DY-750 
DY-751 
DY-751(1-) +  
DY-776 
DY-776(1-) +  
DY-782 
DY-782(2-) +  
eosin YS dye 
epicocconone 
ER-Tracke Blue-White DPX dye 
ethidium +   
ethidium homodimer 
ethidium homodimer tetracation +  
ethyl eosin 
ethyl eosin anion +  
ethyl green 
ethyl nile blue A 
ethyl violet 
ethyl violet cation +  
Eu(tta)3DEADIT 
Evans blue 
EVOblue-30 dye 
exciton 
exciton(1+) +  
Fast green FCF 
flunoxaprofen 
Fluo-3  
Fluo-4 
Fluo-4FF 
Fluo-5F 
Fluo-5N 
fluorescein bis-arsenide 
fluorescein isothiocyanate +   
FluorX +  
FluorX 5-isomer 
FluorX 6-isomer 
FM 1-43 dye 
FM 1-43(2+) +  
FM 4-64 dye 
FM 4-64(2+) +  
fort orange 600 
FUN-1 
fura red 
fura-2 dye 
fura-2(5-) +  
Gallamin blue 
Gallamin blue(1+) +  
gallein 
gallocyanin 
gallocyanin(1+) +  
Guinee green B 
HCK-123 dye 
hemo red 720 
herniarin 
Hoffman's violet 
Hoffman's violet free base 
hops yellow 560 
HOxAsH-bis(1,2-ethanedithiol) 
Indo-1 dye 
iodine green 
Ir(Cn)2(acac) 
Ir(Cs)2(acac) 
JOJO-1 dye 
JOJO-1(4+) +  
Lake Placid 490 
LDS 751 dye 
LDS 751(1+) +  
leucomethylene blue 
lissamine fast red 
lissamine fast red (acid form) 
lissamine rhodamine 
lissamine rhodamine anion +  
LoLo-1 dye 
LoLo-1(4+) +  
lucifer yellow anion +  
lucifer yellow carbohydrazide dye 
lucifer yellow dye 
Luxol fast blue MBS 
Luxol fast blue MBS (acid form) 
magenta II +  
magenta II free base 
magnesium green 
magnesium green(5-) 
magnesium octaethylporphyrin 
magnesium orange G 
magnesium orange G(2-) +  
magnesium phthalocyanine 
magnesium tetraphenylporphyrin 
malachite green 
malachite green cation +   
malachite green isothiocyanate 
malachite green isothiocyanate cation +  
maple red-orange 620 
marina blue dye 
merbromin  
merocyanine 540 
merocyanine 540 anion +  
methyl blue +  
methyl green 
Methyl violet 2B 
Methyl violet 2B free base 
methylene blue  
methylene green 
mitoTracker Deep Red 633 
mitoTracker Green FM 
mitoTracker Orange 
mitoTracker Red 
monobromobimane  
monochlorobimane 
monodansylcadaverine  
N,N-bis(2,4,6-trimethylphenyl)-3,4:9,10-perylenebis(dicarboximide) 
N-[2-(1,3-benzoxazol-2-yl)phenyl]-4-methylbenzenesulfonamide 
N-[2-(4-ethylphenyl)-1,3-benzoxazol-5-yl]-3-nitrobenzamide 
N-[3-(3H-1,3-benzoxazol-2-ylidene)-4-oxo-1-cyclohexa-1,5-dienyl]-2-(4-chlorophenoxy)acetamide 
naphthalene blue black CS 
naphthalene blue black CS (acid form) 
new fuchsin +  
new fuchsin free base 
night blue 
nile blue A 
nile blue perchlorate 
nile red 
NIR-1 dye 
NIR-1(2-) +  
NIR-2 dye 
NIR-2(2-) +  
NIR-3 dye 
NIR-3(2-) +  
NIR-4 dye 
NIR-4(2-) +  
NIR-820 dye 
nuclear fast red 
nuclear fast red free acid 
OG-514 dye 
omocianine 
oregon green 488 
oxazine-1 +  
oxazine-1 perchlorate 
oxazine-170(1+) +  
oxazine-750 
pacific blue +  
pacific blue succinimidyl ester 
palladium(II) meso-tetraphenyl-tetrabenzoporphyrin 
palladium(II) octaethylporphyrinketone 
palladium(II)-5,10,15,20-tetrakis-(2,3,4,5,6-pentafluorphenyl)-porphyrin 
pararosaniline +  
pararosaniline free base  
perylenediimide 
phloxine B 
phosalone  
pibenzimol +   
pinacyanol cation +  
pinacyanol iodide 
platinum(II) 5,10,15,20-tetrakis-(2,3,4,5,6-pentafluorophenyl)porphyrin 
platinum(II) octaethylporphyrin 
platinum(II) octaethylporphyrin ketone 
Po-Pro-1 
Po-Pro-1(2+) +  
Po-Pro-3 
Po-Pro-3(2+) +  
Ponceau S 
Ponceau S (acid form) 
Pontamine sky blue 5B 
Pontamine sky blue 5B (acid form) 
PoPo-1 
PoPo-1(4+) +  
PoPo-3 
PoPo-3(4+) +  
POPOP 
primuline 
primuline (acid form) 
propidium +   
pyranine 
pyranine(3-) +  
Qdot 525 
Qdot 565 
Qdot 585 
Qdot 605 
Qdot 655 
Qdot 705 
Qdot 800 
QPYMe2 fluorescent dye 
QSY21 succinimidyl ester 
QSY21 succinimidyl ester(1+) +  
QSY35 succinimidyl ester 
QSY7 succinimidyl ester 
QSY7 succinimidyl ester(1+) +  
QSY9 succinimidyl ester 
QSY9 succinimidyl ester(1+) +  
resorufin bis-arsenide 
rhod-2 dye 
rhod-2(1+) +  
rhodamine 101 
rhodamine 110 +  
rhodamine 110(1+) +  
rhodamine 123  
rhodamine 123(1+) +   
rhodamine 6G +  
rhodamine 6G(1+) +  
rhodamine 700 perchlorate 
rhodamine B 
rhodamine B 5-isothiocyanate 
rhodamine B 6-isothiocyanate 
rhodamine B isothiocyanate +  
rhodamine B(1+) +  
rhodamine green +  
rhodamine green 5-isomer 
rhodamine green 6-isomer 
rhodamine red-X 
rosanilin +  
rosanilin free base 
rose bengal  
rose bengal free acid 
rose bengal(2-) +   
safranin O 
Sirius red 4B 
Sirius red 4B (acid form) 
Sirius red F3B 
Sirius red F3B (acid form) 
Sirius scarlet GG 
Sirius scarlet GG (acid form) 
snake-eye red 900 
SNIR1 dye 
SNIR1(1-) +  
SNIR2 dye 
SNIR2(1-) +  
SNIR3 dye 
SNIR4 dye 
SNIR4(2-) +  
sodium green 
sodium green(4-) 
sodium-binding benzofuran isophthalate 
squarylium dye III 
succinyl-Leu-Leu-Val-Tyr-7-amino-4-methylcoumarin 
Sudan III  
Sudan IV 
sulforhodamine 101 
sulforhodamine G 
sulforhodamine G anion +  
suvorexant 
tafamidis  
terrylendiimide 
tetramethylrhodamine chloride 
tetramethylrhodamine ethyl ester perchlorate 
tetramethylrhodamine ethyl ester(1+) +  
tetramethylrhodamine phalloidin 
tetramethylrhodamine thiocyanate 
tetramethylrhodamine thiocyanate cation +  
tetramethylrosamine chloride 
texas red 
texas red DHPE 
texas red DHPE(1-) +  
texas red-X 
thiazole orange 
thiazole orange cation +  
thioflavine S 
thioflavine T  
thionine 
thionine acetate 
thionine cation +  
To-Pro-1 
To-Pro-1(2+) +  
To-Pro-3 
To-Pro-3(2+) +  
tolonium chloride 
topaz 
ToTo-1 
ToTo-1(4+) +  
ToTo-3 
ToTo-3(4+) +  
tris(1,10-phenanthroline)ruthenium(II) dichloride dihydrate 
tris(2,2'-bipyridine)ruthenium(II) +  
tris(2,2'-bipyridine)ruthenium(II) dichloride 
tris(4,4'-diphenyl-2,2'-bipyridine)ruthenium(II) +  
tris(4,4'-diphenyl-2,2'-bipyridine)ruthenium(II) chloride 
tris(4,7-diphenyl-1,10-phenanthroline)ruthenium(II) 
trypan blue 
victoria blue 4R 
victoria blue B 
victoria blue R 
X-rhod-1 
X-rhod-1(1+) +  
yakima yellow phosphoramidite 
Yo-Pro-1 
Yo-Pro-1(2+) +  
Yo-Pro-3 
Yo-Pro-3(2+) +  
YoYo-1 
YoYo-1(4+) +  
YoYo-3 
YoYo-3(4+) +  
zinc octaethylporphyrin 
zinc phthalocyanine 
zinc tetramesitylporphyrin 
zinc tetraphenylporphyrin 

Synonyms
Exact Synonyms: 3-octadecyl-2-[3-(3-octadecyl-1,3-benzoxazol-2(3H)-ylidene)prop-1-en-1-yl]-1,3-benzoxazol-3-ium
Related Synonyms: Formula=C53H85N2O2 ;   InChI=1S/C53H85N2O2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-37-46-54-48-40-33-35-42-50(48)56-52(54)44-39-45-53-55(49-41-34-36-43-51(49)57-53)47-38-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2/h33-36,39-45H,3-32,37-38,46-47H2,1-2H3/q+1 ;   InChIKey=OVZNYHIJJRAIQL-UHFFFAOYSA-N ;   SMILES=[H]C(=C([H])c1oc2ccccc2[n+]1CCCCCCCCCCCCCCCCCC)C([H])=C1Oc2ccccc2N1CCCCCCCCCCCCCCCCCC

paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.