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ONTOLOGY REPORT - ANNOTATIONS


Term:type II collagen
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Accession:XCO:0000281 term browser browse the term
Definition:A condition in which the major influencing factor is the fibrillar collagen which comprises the main component of cartilage and is also found in the vitreous humor of the eye. Collagens are a family of extracellular, closely related proteins occurring as a major component of connective tissue, giving it strength and flexibility.
Synonyms:exact_synonym: type 2 collagen


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type II collagen term browser
Symbol Object Name JBrowse Chr Start Stop Reference
Q Cia1 Collagen induced arthritis QTL 1 JBrowse link 20 4,855,475 15,050,565 RGD:61062
Q Cia10 Collagen induced arthritis QTL 10 JBrowse link 2 194,998,627 239,998,627 RGD:61063
Q Cia11 Collagen induced arthritis QTL 11 JBrowse link 3 34,394,121 103,141,944 RGD:61066
Q Cia12 Collagen induced arthritis QTL 12 JBrowse link 12 15,714,609 41,291,738 RGD:61066
Q Cia13 Collagen induced arthritis QTL 13 JBrowse link 4 132,455,408 168,047,091 RGD:61067
Q Cia14 Collagen induced arthritis QTL 14 JBrowse link 19 11,303,927 47,879,277 RGD:61066
Q Cia15 Collagen induced arthritis QTL 15 JBrowse link 9 2,880,977 47,375,681 RGD:61067
Q Cia16 Collagen induced arthritis QTL 16 JBrowse link 10 6,429,075 99,492,409 RGD:61067
Q Cia17 Collagen induced arthritis QTL 17 JBrowse link 18 32,670,352 73,016,546 RGD:61067
Q Cia18 Collagen induced arthritis QTL 18 JBrowse link X 15,688,119 127,888,215 RGD:61067
Q Cia19 Collagen induced arthritis QTL 19 JBrowse link X 70,352,120 127,888,215 RGD:61067
Q Cia2 Collagen induced arthritis QTL 2 JBrowse link 1 79,689,765 94,909,507 RGD:61062
Q Cia20 Collagen induced arthritis QTL 20 JBrowse link 10 24,483,076 107,857,673 RGD:631168
Q Cia21 Collagen induced arthritis QTL 21 JBrowse link 10 14,827,894 107,857,673 RGD:631168
Q Cia22 Collagen induced arthritis QTL 22 JBrowse link 10 41,260,363 107,857,673 RGD:631168
Q Cia23 Collagen induced arthritis QTL 23 JBrowse link 10 41,260,363 107,857,673 RGD:631168
Q Cia24 Collagen induced arthritis QTL 24 JBrowse link 4 145,373,934 176,509,907 RGD:61066
Q Cia25 Collagen induced arthritis QTL 25 JBrowse link 12 22,650,721 41,291,738 RGD:1285224
Q Cia26 Collagen induced arthritis QTL 26 JBrowse link 18 58,196,300 88,201,929 RGD:1285224
Q Cia27 Collagen induced arthritis QTL 27 JBrowse link 10 79,927,661 112,626,471 RGD:61063
Q Cia28 Collagen induced arthritis QTL 28 JBrowse link 10 99,492,217 107,857,673 RGD:1359065
Q Cia29 Collagen induced arthritis QTL 29 JBrowse link 10 35,139,424 80,139,424 RGD:1359065
Q Cia3 Collagen induced arthritis QTL 3 JBrowse link 4 99,066,823 144,066,823 RGD:61062
Q Cia4 Collagen induced arthritis QTL 4 JBrowse link 7 67,346,146 69,399,731 RGD:61062
Q Cia5 Collagen induced arthritis QTL 5 JBrowse link 10 94,486,204 107,857,673 RGD:61062
Q Cia6 Collagen induced arthritis QTL 6 JBrowse link 8 89,058,229 132,243,842 RGD:61067
Q Cia7 Collagen induced arthritis QTL 7 JBrowse link 2 60,325,352 147,522,851 RGD:61067
Q Cia8 Collagen induced arthritis QTL 8 JBrowse link 7 32,572,942 77,572,942 RGD:61069
Q Cia9 Collagen induced arthritis QTL 9 RGD:61063
Q Ciaa1 CIA Autoantibody QTL 1 JBrowse link 20 3,151,815 6,896,013 RGD:61067
Q Ciaa2 CIA Autoantibody QTL 2 JBrowse link 10 65,590,122 110,590,122 RGD:61066
Q Ciaa3 CIA Autoantibody QTL 3 JBrowse link 9 5,724,254 25,692,342 RGD:61066
Q Ciaa4 CIA Autoantibody QTL 4 JBrowse link 4 125,884,464 168,047,091 RGD:61067
Q Ciaa5 CIA Autoantibody QTL 5 JBrowse link 5 97,921,932 149,030,144 RGD:61067

Related Phenotype Data for Term "type II collagen" (XCO:0000281)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Term paths to the root
Path 1
Term Annotations click to browse term
  experimental condition 2376
    disease inducing agent 129
      disease inducing chemical 115
        arthritis inducing chemical 112
          collagen 34
            type II collagen 34
Path 2
Term Annotations click to browse term
  experimental condition 2376
    chemical 707
      chemical with specified function 434
        disease inducing chemical 115
          arthritis inducing chemical 112
            collagen 34
              type II collagen 34
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.