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EXPERIMENTAL CONDITION - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:pathogen
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Accession:XCO:0000236 term browser browse the term
Definition:An biological agent that causes disease, especially a living microorganism such as a bacterium, virus, or fungus.


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Herpes simplex virus type 1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw143 Body weight QTL 143 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
Q Bw144 Body weight QTL 144 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:22,710,685...34,430,484 JBrowse link
Q Bw145 Body weight QTL 145 IDA RGD PMID:22761571 RGD:7240516 NCBI chr10:41,944,526...78,307,017 JBrowse link
Q Vie1 Viral induced encephalitis QTL 1 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
Q Vie2 Viral induced encephalitis QTL 2 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 3:145,956,084...169,034,231 JBrowse link
Q Vie3 Viral induced encephalitis QTL 3 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 6:96,833,997...140,994,061 JBrowse link
Q Vie4 Viral induced encephalitis QTL 4 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:62,933,508...82,490,359 JBrowse link
Q Vie5 Viral induced encephalitis QTL 5 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
Kilham rat virus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iddm20 Insulin dependent diabetes mellitus QTL 20 IDA RGD PMID:15793267 RGD:1358924 NCBI chr17:13,986,773...21,975,515 JBrowse link
Q Iddm37 Insulin dependent diabetes mellitus QTL 37 IDA RGD PMID:19720792 RGD:2313174 NCBI chr20:1,527,842...46,527,842 JBrowse link
Toxoplasma gondii cysts term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Toxo1 Toxoplasma gondii resistance QTL 1 IDA RGD PMID:16407112 RGD:1578521 NCBI chr10:52,200,030...59,378,278 JBrowse link
Trichinella spiralis larvae term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Tspe1 Trichinella spiralis expulsion QTL 1 IDA RGD PMID:16465509 RGD:1578305 NCBI chr 9:61,381,434...65,691,299 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  experimental condition 2376
    disease-inducing agent 223
      pathogen 12
        bacterial pathogen + 0
        eukaryotic pathogen + 2
        prion 0
        viral pathogen + 10
paths to the root