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EXPERIMENTAL CONDITION - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:hormone
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Accession:XCO:0000125 term browser browse the term
Definition:A chemical substance which in its endogenous state is produced by an organ, cells of an organ or scattered cells, having a specific regulatory affect on the activity of an organ or tissue.



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17 beta-estradiol term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr39 Anxiety related response QTL 39 IDA RGD PMID:21516450 RGD:6218999
Q Anxrr40 Anxiety related response QTL 40 IDA RGD PMID:21516450 RGD:6218999 NCBI chr 4:62,753,847...107,753,847 JBrowse link
Q Anxrr42 Anxiety related response QTL 42 IDA RGD PMID:21516450 RGD:6218999 NCBI chr 4:144,639,524...182,687,754 JBrowse link
Q Anxrr47 Anxiety related response QTL 47 IDA RGD PMID:21516450 RGD:6218999 NCBI chr 4:10,084,089...55,084,089 JBrowse link
Q Anxrr49 Anxiety related response QTL 49 IDA RGD PMID:21516450 RGD:6218999 NCBI chr 4:62,753,847...107,753,847 JBrowse link
Q Anxrr50 Anxiety related response QTL 50 IDA RGD PMID:21516450 RGD:6218999
Q Anxrr51 Anxiety related response QTL 51 IDA RGD PMID:21516450 RGD:6218999 NCBI chr 4:124,778,595...169,778,595 JBrowse link
Q Emca1 Estrogen-induced mammary cancer QTL 1 IDA RGD PMID:15611180 RGD:1358124 NCBI chr 5:99,216,724...148,607,142 JBrowse link
Q Emca10 Estrogen-induced mammary cancer QTL 10 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 6:16,536,140...61,536,140 JBrowse link
Q Emca11 Estrogen-induced mammary cancer QTL 11 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:99,753,548...113,061,097 JBrowse link
Q Emca12 Estrogen-induced mammary cancer QTL 12 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:124,160,767...133,749,643 JBrowse link
Q Emca13 Estrogen-induced mammary cancer QTL 13 IDA RGD PMID:23151807 RGD:7364727 NCBI chr 5:9,823,266...99,753,708 JBrowse link
Q Emca2 Estrogen-induced mammary cancer QTL 2 IDA RGD PMID:15611180 RGD:1358124 NCBI chr18:18,007,599...63,571,040 JBrowse link
Q Emca4 Estrogen-induced mammary cancer QTL 4 IDA 27.5mg crystalline implant RGD PMID:16885383 RGD:1642522 NCBI chr 7:62,004,452...101,773,158 JBrowse link
Q Emca5 Estrogen-induced mammary cancer QTL 5 IDA 27.5mg crystalline implant RGD PMID:16885383 RGD:1642522 NCBI chr 3:43,827,364...169,034,231 JBrowse link
Q Emca6 Estrogen-induced mammary cancer QTL 6 IDA 27.5mg/ml crystalline implant RGD PMID:16885383 RGD:1642522 NCBI chr 4:44,463,720...155,883,716 JBrowse link
Q Emca7 Estrogen-induced mammary cancer QTL 7 IDA 27.5mg/ml crystalline implant RGD PMID:16885383 RGD:1642522 NCBI chr 6:15,107,216...107,351,382 JBrowse link
Q Emca8 Estrogen-induced mammary cancer QTL 8 IDA 27.5mg/ml crystalline implant RGD PMID:16885383 RGD:1642522 NCBI chr 5:50,328,551...141,643,988 JBrowse link
Q Ept15 Estrogen-induced pituitary tumorigenesis QTL 15 IDA RGD PMID:2292503 RGD:7175546 NCBI chr 6:9,843,312...20,338,915 JBrowse link
Q Ept16 Estrogen-induced pituitary tumorigenesis QTL 16 IDA RGD PMID:2292503 RGD:7175546 NCBI chr 3:47,233,430...110,362,260 JBrowse link
Q Ept17 Estrogen-induced pituitary tumorigenesis QTL 17 IDA RGD PMID:2292503 RGD:7175546 NCBI chr 3:6,537,645...10,778,823 JBrowse link
Q Ept18 Estrogen-induced pituitary tumorigenesis QTL 18 IDA RGD PMID:2292503 RGD:7175546 NCBI chr10:73,453,136...96,120,911 JBrowse link
Q Ept5 Estrogen-induced pituitary tumorigenesis QTL 5 IDA 27.5mg/ml crystalline implant RGD PMID:17876666 RGD:1642526 NCBI chr 4:83,428,419...177,635,233 JBrowse link
Q Ept7 Estrogen-induced pituitary tumorigenesis QTL 7 IDA 27.5mg/ml crystalline implant RGD PMID:17876666 RGD:1642526 NCBI chr 7:62,004,452...101,773,158 JBrowse link
Q Eutr1 Estrogen induced uterine response QTL 1 IDA RGD PMID:16284801 RGD:1559292 NCBI chr 5:2,138,965...166,875,058 JBrowse link
angiotensin II term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf16 Renal function QTL 16 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:5,074,497...34,434,305 JBrowse link
Q Rf22 Renal function QTL 22 IDA RGD PMID:14532335 RGD:727992 NCBI chr14:42,262,529...95,023,211 JBrowse link
Q Rf32 Renal function QTL 32 IDA RGD PMID:11721057 RGD:70849 NCBI chr 5:129,132,428...143,070,159 JBrowse link
Q Rf37 Renal function QTL 37 IDA RGD PMID:11721057 RGD:70849 NCBI chr 6:72,202,632...115,200,186 JBrowse link
Q Rf41 Renal function QTL 41 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:28,064,557...40,218,380 JBrowse link
Q Rf42 Renal function QTL 42 IDA RGD PMID:11721057 RGD:70849 NCBI chr15:17,362,897...73,690,657 JBrowse link
Q Rf45 Renal function QTL 45 IDA RGD PMID:11721057 RGD:70849 NCBI chr19:15,605,023...46,559,041 JBrowse link
Q Rf8 Renal function QTL 8 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:228,581,588...259,647,894 JBrowse link
deoxycorticosterone acetate term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends1 Renal damage susceptibility QTL 1 IDA RGD PMID:10454439 RGD:632218 NCBI chr 1:169,537,671...214,537,671 JBrowse link
diethylstilbestrol term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Edpm1 Estrogen-dependent pituitary mass QTL 1 IDA RGD PMID:9337394 RGD:61074 NCBI chr 2:35,134,841...88,029,593 JBrowse link
Q Edpm10 Estrogen-dependent pituitary mass QTL 10 IDA RGD PMID:9337394 RGD:61074
Q Edpm11 Estrogen-dependent pituitary mass QTL 11 IDA RGD PMID:11003699 RGD:629550 NCBI chr 9:1...43,718,459 JBrowse link
Q Edpm12 Estrogen-dependent pituitary mass QTL 12 IDA RGD PMID:11003699 RGD:629550 NCBI chr  X:2,927,898...47,927,898 JBrowse link
Q Edpm2 Estrogen-dependent pituitary mass QTL 2 IDA RGD PMID:9337394 RGD:61074 NCBI chr 2:76,539,322...202,447,032 JBrowse link
Q Edpm3 Estrogen-dependent pituitary mass QTL 3 IDA RGD PMID:9337394 RGD:61074 NCBI chr 3:53,184,692...89,878,207 JBrowse link
Q Edpm5 Estrogen-dependent pituitary mass QTL 5 IDA RGD PMID:9337394 RGD:61074 NCBI chr 5:68,984,307...104,251,008 JBrowse link
Q Edpm9 Estrogen-dependent pituitary mass QTL 9 IDA RGD PMID:9337394 RGD:61074 NCBI chr 9:63,869,687...108,869,687 JBrowse link
Q Ept1 Estrogen-induced pituitary tumorigenesis QTL 1 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 6:9,843,312...20,338,915 JBrowse link
Q Ept10 Estrogen-induced pituitary tumorigenesis QTL 10 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 1:192,825,253...243,914,732 JBrowse link
Q Ept13 Estrogen-induced pituitary tumorigenesis QTL 13 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 1:77,494,165...122,494,165 JBrowse link
Q Ept2 Estrogen-induced pituitary tumorigenesis QTL 2 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 3:47,233,430...110,362,260 JBrowse link
Q Ept6 Estrogen-induced pituitary tumorigenesis QTL 6 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 3:6,537,645...10,778,823 JBrowse link
Q Ept9 Estrogen-induced pituitary tumorigenesis QTL 9 IDA RGD PMID:15687265 RGD:1334449 NCBI chr10:73,453,136...96,120,911 JBrowse link
Q Esta1 Estrogen-induced thymic atrophy QTL 1 IDA RGD PMID:16688534 RGD:1579780 NCBI chr10:21,329,805...61,345,413 JBrowse link
Q Esta2 Estrogen-induced thymic atrophy QTL 2 IDA RGD PMID:16688534 RGD:1579780 NCBI chr 2:189,599,258...226,936,289 JBrowse link
Q Esta3 Estrogen-induced thymic atrophy QTL 3 IDA RGD PMID:16688534 RGD:1579780 NCBI chr 2:136,916,935...189,599,348 JBrowse link
Q Esta4 Estrogen-induced thymic atrophy QTL 4 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 3:47,233,211...147,415,807 JBrowse link
Q Eutr2 Estrogen induced uterine response QTL 2 IDA RGD PMID:16284802 RGD:1559291 NCBI chr 5:34,730,116...104,251,008 JBrowse link
Q Teswt1 Testicular weight QTL 1 IDA RGD PMID:16651691 RGD:1625009 NCBI chr 7:80,221,299...94,811,326 JBrowse link
Q Teswt2 Testicular weight QTL 2 IDA RGD PMID:16651691 RGD:1625009 NCBI chr 1:197,697,768...238,755,659 JBrowse link
insulin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco11 Glucose level QTL 11 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:85,379,421...167,139,601 JBrowse link
Q Gluco12 Glucose level QTL12 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:5,218,392...29,593,287 JBrowse link
Q Gluco16 Glucose level QTL 16 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...30,372,989 JBrowse link
Q Gluco17 Glucose level QTL 17 IDA RGD PMID:9171835 RGD:61078
Q Gluco3 Glucose level QTL 3 IDA RGD PMID:9171835 RGD:61078
Q Gluco4 Glucose level QTL 4 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...33,250,345 JBrowse link
Q Gluco5 Glucose level QTL 5 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...33,250,345 JBrowse link
norepinephrine term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp185 Blood pressure QTL 185 IDA RGD PMID:14532335 RGD:727992 NCBI chr 9:61,381,434...104,821,652 JBrowse link
Q Bp191 Blood pressure QTL 191 IDA RGD PMID:14532335 RGD:727992
Q Rf11 Renal function QTL 11 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:121,056,165...145,956,249 JBrowse link
Q Rf12 Renal function QTL 12 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:61,017,749...121,056,321 JBrowse link
Q Rf13 Renal function QTL 13 IDA RGD PMID:14532335 RGD:727992 NCBI chr 4:157,710,145...182,687,754 JBrowse link
Q Rf14 Renal function QTL 14 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:34,434,137...77,102,317 JBrowse link
Q Rf15 Renal function QTL 15 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:5,074,497...54,641,141 JBrowse link
Q Rf17 Renal function QTL 17 IDA RGD PMID:14532335 RGD:727992 NCBI chr 8:28,242,912...73,242,912 JBrowse link
Q Rf38 Renal function QTL 38 IDA RGD PMID:11721057 RGD:70849 NCBI chr 6:32,074,428...72,227,641 JBrowse link
Q Rf40 Renal function QTL 40 IDA RGD PMID:11721057 RGD:70849 NCBI chr10:29,299,504...64,155,584 JBrowse link

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  experimental condition 2376
    chemical 707
      chemical with specified function 434
        hormone 72
          melatonin + 0
          monoamine hormone + 10
          peptide hormone + 15
          steroid hormone + 47
paths to the root