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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:nervous/sensory system trait
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Accession:VT:1000781 term browser browse the term
Definition:Any measurable or observable characteristic of the system responsible for receiving and processing information about an organism's environment and controlling behavior.


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brain electrophysiology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Swd1 Spike wave discharge measurement QTL 1 IDA RGD PMID:15270755 RGD:1302436 NCBI chr 9:101,597,509...102,302,863 JBrowse link
Q Swd2 Spike wave discharge measurement QTL 2 IDA RGD PMID:15270755 RGD:1302436 NCBI chr 5:151,113,452...164,465,185 JBrowse link
Q Swd3 Spike wave discharge measurement QTL 3 IDA RGD PMID:15030491 RGD:1553898 NCBI chr 4:58,432,133...92,991,462 JBrowse link
Q Swd4 Spike wave discharge measurement QTL 4 IDA RGD PMID:15030491 RGD:1553898 NCBI chr 7:86,983,365...131,983,365 JBrowse link
Q Swd5 Spike wave discharge measurement QTL 5 IDA RGD PMID:15030491 RGD:1553898 NCBI chr 8:14,906,751...59,906,751 JBrowse link
Q Swd6 Spike wave discharge measurement QTL 6 IDA RGD PMID:23903052 RGD:7794751
Q Swd7 Spike wave discharge measurement QTL 7 IDA RGD PMID:23903052 RGD:7794751
brain integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Toxo1 Toxoplasma gondii resistance QTL 1 IDA RGD PMID:16407112 RGD:1578521 NCBI chr10:52,200,030...59,378,278 JBrowse link
Q Vie1 Viral induced encephalitis QTL 1 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
Q Vie2 Viral induced encephalitis QTL 2 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 3:145,956,084...169,034,231 JBrowse link
Q Vie3 Viral induced encephalitis QTL 3 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 6:96,833,997...140,994,061 JBrowse link
Q Vie4 Viral induced encephalitis QTL 4 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:62,933,508...82,490,359 JBrowse link
Q Vie5 Viral induced encephalitis QTL 5 IDA RGD PMID:22761571 RGD:7240516 NCBI chr 4:34,430,484...82,490,359 JBrowse link
brain ventricle morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bvd1 Brain ventricular dilatation QTL 1 IDA RGD PMID:15473982 RGD:1302890 NCBI chr 9:75,712,843...111,552,878 JBrowse link
Q Bvd2 Brain ventricular dilatation QTL 2 IDA RGD PMID:15473982 RGD:1302890 NCBI chr10:93,223,816...107,057,807 JBrowse link
Q Bvd3 Brain ventricular dilatation QTL 3 IDA RGD PMID:15473982 RGD:1302890 NCBI chr11:69,446,070...82,846,715 JBrowse link
Q Bvd4 Brain ventricular dilatation QTL 4 IDA RGD PMID:15473982 RGD:1302890 NCBI chr17:53,498,828...82,479,847 JBrowse link
Q Bvd5 Brain ventricular dilatation QTL 5 IDA RGD PMID:15473982 RGD:1302890 NCBI chr17:31,990,784...81,292,925 JBrowse link
Q Bvd6 Brain ventricular dilatation QTL 6 IDA RGD PMID:11178739 RGD:68693 NCBI chr11:66,113,321...82,169,223 JBrowse link
cerebrum integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp49 Blood pressure QTL 49 IDA RGD PMID:9241273 RGD:61056 NCBI chr 5:60,293,434...98,603,051 JBrowse link
Q Strs1 Sensitivity to stroke QTL 1 IDA RGD PMID:8696337 RGD:61093 NCBI chr 1:121,767,634...166,767,634 JBrowse link
Q Strs2 Sensitivity to stroke QTL 2 IDA RGD PMID:8696337 RGD:61093 NCBI chr 5:135,929,696...166,875,058 JBrowse link
Q Strs3 Sensitivity to stroke QTL 3 IDA RGD PMID:8696337 RGD:61093 NCBI chr 4:40,433,388...85,433,388 JBrowse link
Q Strs4 Sensitivity to stroke QTL 4 IDA RGD PMID:23690346 RGD:7411685 NCBI chr 1:78,430,536...123,430,536 JBrowse link
Q Strs5 Sensitivity to stroke QTL 5 IDA RGD PMID:23690346 RGD:7411685 NCBI chr18:49,999,958...65,845,095 JBrowse link
Q Strs6 Sensitivity to stroke QTL 6 IDA RGD PMID:23690346 RGD:7411685 NCBI chr 5:134,972,980...138,113,556 JBrowse link
Q Strs7 Sensitivity to stroke QTL 7 IDA RGD PMID:23690346 RGD:7411685 NCBI chr15:40,289,901...49,308,583 JBrowse link
mechanical nociception trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pain1 Pain QTL 1 IDA RGD PMID:17560719 RGD:1643003 NCBI chr 2:26,999,571...48,268,661 JBrowse link
Q Pain2 Pain QTL 2 IDA RGD PMID:17560719 RGD:1643003 NCBI chr 7:9,462,246...98,011,544 JBrowse link
nervous system integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae1 Experimental allergic encephalomyelitis QTL 1 IDA RGD PMID:10640775 RGD:61031 NCBI chr20:4,606,607...6,691,706 JBrowse link
Q Eae10 Experimental allergic encephalomyelitis QTL 10 IDA RGD PMID:10640775 RGD:61031 NCBI chr14:17,622,685...18,274,498 JBrowse link
Q Eae11 Experimental allergic encephalomyelitis QTL 11 IDA RGD PMID:10640775 RGD:61031 NCBI chr 4:1...39,505,420 JBrowse link
Q Eae12 Experimental allergic encephalomyelitis QTL 12 IDA RGD PMID:10545597 RGD:69695 NCBI chr10:92,238,497...101,012,337 JBrowse link
Q Eae13 Experimental allergic encephalomyelitis QTL 13 IDA RGD PMID:10545597 RGD:69695 NCBI chr12:24,139,202...36,638,073 JBrowse link
Q Eae14 Experimental allergic encephalomyelitis QTL 14 IDA RGD PMID:10545597 RGD:69695 NCBI chr13:23,203,448...68,203,448 JBrowse link
Q Eae15 Experimental allergic encephalomyelitis QTL 15 IDA RGD PMID:10545597 RGD:69695 NCBI chr18:76,477,814...77,209,844 JBrowse link
Q Eae16 Experimental allergic encephalomyelitis QTL 16 IDA RGD PMID:12517974 RGD:629629 NCBI chr 8:8,462,195...110,921,472 JBrowse link
Q Eae17 Experimental allergic encephalomyelitis QTL 17 IDA RGD PMID:12517974 RGD:629629 NCBI chr13:8,897,350...101,631,289 JBrowse link
Q Eae18 Experimental allergic encephalomyelitis QTL 18 IDA RGD PMID:11486278 RGD:1302800 NCBI chr10:107,057,622...107,211,142 JBrowse link
Q Eae18a Experimental allergic encephalomyelitis QTL 18a IDA RGD PMID:15240732 RGD:1302437 NCBI chr10:53,797,385...58,445,852 JBrowse link
Q Eae18b Experimental allergic encephalomyelitis QTL 18b IDA RGD PMID:15240732 RGD:1302437 NCBI chr10:61,248,303...67,785,171 JBrowse link
Q Eae19 Experimental allergic encephalomyelitis QTL 19 IDA RGD PMID:15716504 RGD:1549617 NCBI chr15:76,306,099...90,088,744 JBrowse link
Q Eae2 Experimental allergic encephalomyelitis QTL 2 IDA RGD PMID:9973459 RGD:69694 NCBI chr 4:21,333,343...39,505,420 JBrowse link
Q Eae20 Experimental allergic encephalomyelitis QTL 20 IDA RGD PMID:15634914 RGD:1547849 NCBI chr 4:153,031,106...158,841,762 JBrowse link
Q Eae22 Experimental allergic encephalomyelitis QTL 22 IDA RGD PMID:15634914 RGD:1547849
Q Eae23 Experimental allergic encephalomyelitis QTL 23 IDA RGD PMID:16624898 RGD:2293859 NCBI chr10:55,273,696...60,677,262 JBrowse link
Q Eae24 Experimental allergic encephalomyelitis QTL 24 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:66,993,185...72,752,834 JBrowse link
Q Eae25 Experimental allergic encephalomyelitis QTL 25 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:78,882,817...83,007,655 JBrowse link
Q Eae26 Experimental allergic encephalomyelitis QTL 26 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:88,656,681...103,194,984 JBrowse link
Q Eae27 Experimental allergic encephalomyelitis QTL 27 IDA RGD PMID:19675581 RGD:2317591 NCBI chr 4:103,194,805...112,478,794 JBrowse link
Q Eae29 Experimental allergic encephalomyelitis QTL 29 IDA RGD PMID:21041731 RGD:4888518 NCBI chr 1:5,925,877...24,697,545 JBrowse link
Q Eae3 Experimental allergic encephalomyelitis QTL 3 IDA RGD PMID:9973459 RGD:69694 NCBI chr10:26,521,957...61,345,413 JBrowse link
Q Eae30 Experimental allergic encephalomyelitis QTL 30 IDA RGD PMID:20072140 RGD:6892695 NCBI chr 1:123,053,310...128,593,844 JBrowse link
Q Eae31 Experimental allergic encephalomyelitis QTL 31 IDA RGD PMID:20072140 RGD:6892695 NCBI chr 1:178,810,256...188,377,506 JBrowse link
Q Eae32 Experimental allergic encephalomyelitis QTL 32 IDA RGD PMID:12517974 RGD:629629 NCBI chr17:27,027,949...36,146,731 JBrowse link
Q Eae33 Experimental allergic encephalomyelitis QTL 33 IDA RGD PMID:12517974 RGD:629629 NCBI chr17:50,909,099...86,022,412 JBrowse link
Q Eae4 Experimental allergic encephalomyelitis QTL 4 IDA RGD PMID:10072499 RGD:69712 NCBI chr 9:1...25,661,317 JBrowse link
Q Eae5 Experimental allergic encephalomyelitis QTL 5 IDA RGD PMID:10640775 RGD:61031 NCBI chr12:19,610,870...46,669,029 JBrowse link
Q Eae8 Experimental allergic encephalomyelitis QTL 8 IDA RGD PMID:10640775 RGD:61031 NCBI chr19:24,816,041...33,061,905 JBrowse link
Q Eaex Experimental allergic encephalomyelitis QTL x IDA RGD PMID:10640775 RGD:61031 NCBI chr 5:55,715,622...100,715,622 JBrowse link
Q Eaey Experimental allergic encephalomyelitis QTL y IDA RGD PMID:10640775 RGD:61031 NCBI chr18:46,988,939...60,377,753 JBrowse link
Q Eaez Experimental allergic encephalomyelitis QTL z IDA RGD PMID:10640775 RGD:61031 NCBI chr18:12,357,786...12,874,620 JBrowse link
Q Ean1 Experimental allergic neuritis QTL 1 IDA RGD PMID:15342198 RGD:2306736
Q Ean2 Experimental allergic neuritis QTL 2 IDA RGD PMID:19299744 RGD:2306769 NCBI chr 4:83,428,419...95,853,334 JBrowse link
Q Ean3 Experimental allergic neuritis QTL 3 IDA RGD PMID:19299744 RGD:2306769 NCBI chr10:53,797,385...66,979,128 JBrowse link
Q Ean4 Experimental allergic neuritis QTL 4 IDA RGD PMID:19299744 RGD:2306769 NCBI chr10:84,022,321...93,995,963 JBrowse link
Q Ean5 Experimental allergic neuritis QTL 5 IDA RGD PMID:19299744 RGD:2306769 NCBI chr10:72,552,416...93,995,749 JBrowse link
Q Ean6 Experimental allergic neuritis QTL 6 IDA RGD PMID:19299744 RGD:2306769 NCBI chr12:19,610,870...24,139,202 JBrowse link
Q Neudeg1 Neurodegradation QTL 1 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 8:30,188,867...94,457,446 JBrowse link
Q Neudeg2 Neurodegradation QTL 2 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 5:24,838,710...44,045,280 JBrowse link
Q Neuinf1 Neuroinflammation QTL 1 IDA RGD PMID:14586010 RGD:1358788 NCBI chr 5:154,828,214...166,875,058 JBrowse link
Q Neuinf10 Neuroinflammation QTL 10 IDA RGD PMID:19525015 RGD:2311085 NCBI chr11:31,239,134...78,851,519 JBrowse link
Q Neuinf11 Neuroinflammation QTL 11 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 3:15,005,422...76,927,699 JBrowse link
Q Neuinf12 Neuroinflammation QTL 12 IDA RGD PMID:19525015 RGD:2311085 NCBI chr15:1...55,302,115 JBrowse link
Q Neuinf2 Neuroinflammation QTL 2 IDA RGD PMID:14586010 RGD:1358788 NCBI chr10:6,154,377...6,357,896 JBrowse link
Q Neuinf3 Neuroinflammation QTL 3 IDA RGD PMID:14586010 RGD:1358788 NCBI chr10:3,406,320...5,387,112 JBrowse link
Q Neuinf4 Neuroinflammation QTL 4 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 1:1...28,736,750 JBrowse link
Q Neuinf5 Neuroinflammation QTL 5 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:9,462,246...58,265,113 JBrowse link
Q Neuinf6 Neuroinflammation QTL 6 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:1...27,829,089 JBrowse link
Q Neuinf7 Neuroinflammation QTL 7 IDA RGD PMID:19525015 RGD:2311085 NCBI chr10:72,224,939...107,211,142 JBrowse link
Q Neuinf8 Neuroinflammation QTL 8 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 1:57,336,763...151,090,257 JBrowse link
Q Neuinf9 Neuroinflammation QTL 9 IDA RGD PMID:19525015 RGD:2311085 NCBI chr10:5,801,990...62,146,030 JBrowse link
Q Schws1 Schwannoma susceptibility QTL 1 IDA RGD PMID:16003739 RGD:1559300 NCBI chr10:40,035,094...102,359,817 JBrowse link
Q Schws2 Schwannoma susceptibility QTL 2 IDA RGD PMID:16003739 RGD:1559300
Q Schws3 Schwannoma susceptibility QTL 3 IDA RGD PMID:16003739 RGD:1559300 NCBI chr 3:118,839,124...163,839,124 JBrowse link
Q Schws4 Schwannoma susceptibility QTL 4 IDA RGD PMID:16003739 RGD:1559300 NCBI chr 6:83,190,345...106,747,639 JBrowse link
Q Schws5 Schwannoma susceptibility QTL 5 IDA RGD PMID:16003739 RGD:1559300
Q Schws6 Schwannoma susceptibility QTL 6 IDA RGD PMID:16003739 RGD:1559300 NCBI chr15:53,806,152...98,806,152 JBrowse link
Q Schws7 Schwannoma susceptibility QTL 7 IDA RGD PMID:16003739 RGD:1559300 NCBI chr10:4,765,527...19,816,042 JBrowse link
Q Schws8 Schwannoma susceptibility QTL 8 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:94,968,928...139,968,928 JBrowse link
Q Schws9 Schwannoma susceptibility QTL 9 IDA RGD PMID:25303613 RGD:11566050 NCBI chr 6:61,747,639...106,747,639 JBrowse link
pituitary gland mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Edpm1 Estrogen-dependent pituitary mass QTL 1 IDA RGD PMID:9337394 RGD:61074 NCBI chr 2:35,134,841...88,029,593 JBrowse link
Q Edpm10 Estrogen-dependent pituitary mass QTL 10 IDA RGD PMID:9337394 RGD:61074
Q Edpm11 Estrogen-dependent pituitary mass QTL 11 IDA RGD PMID:11003699 RGD:629550 NCBI chr 9:1...43,718,459 JBrowse link
Q Edpm12 Estrogen-dependent pituitary mass QTL 12 IDA RGD PMID:11003699 RGD:629550 NCBI chr  X:2,927,898...47,927,898 JBrowse link
Q Edpm2 Estrogen-dependent pituitary mass QTL 2 IDA RGD PMID:9337394 RGD:61074 NCBI chr 2:76,539,322...202,447,032 JBrowse link
Q Edpm3 Estrogen-dependent pituitary mass QTL 3 IDA RGD PMID:9337394 RGD:61074 NCBI chr 3:53,184,692...89,878,207 JBrowse link
Q Edpm5 Estrogen-dependent pituitary mass QTL 5 IDA RGD PMID:9337394 RGD:61074 NCBI chr 5:68,984,307...104,251,008 JBrowse link
Q Edpm9 Estrogen-dependent pituitary mass QTL 9 IDA RGD PMID:9337394 RGD:61074 NCBI chr 9:63,869,687...108,869,687 JBrowse link
Q Ept1 Estrogen-induced pituitary tumorigenesis QTL 1 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 6:9,843,312...20,338,915 JBrowse link
Q Ept10 Estrogen-induced pituitary tumorigenesis QTL 10 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 1:192,825,253...243,914,732 JBrowse link
Q Ept13 Estrogen-induced pituitary tumorigenesis QTL 13 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 1:77,494,165...122,494,165 JBrowse link
Q Ept15 Estrogen-induced pituitary tumorigenesis QTL 15 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 6:9,843,312...20,338,915 JBrowse link
Q Ept16 Estrogen-induced pituitary tumorigenesis QTL 16 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 3:47,233,430...110,362,260 JBrowse link
Q Ept17 Estrogen-induced pituitary tumorigenesis QTL 17 IDA RGD PMID:18420736 RGD:2292503 NCBI chr 3:6,537,645...10,778,823 JBrowse link
Q Ept18 Estrogen-induced pituitary tumorigenesis QTL 18 IDA RGD PMID:18420736 RGD:2292503 NCBI chr10:73,453,136...96,120,911 JBrowse link
Q Ept2 Estrogen-induced pituitary tumorigenesis QTL 2 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 3:47,233,430...110,362,260 JBrowse link
Q Ept5 Estrogen-induced pituitary tumorigenesis QTL 5 IDA RGD PMID:17876666 RGD:1642526 NCBI chr 4:83,428,419...177,635,233 JBrowse link
Q Ept6 Estrogen-induced pituitary tumorigenesis QTL 6 IDA RGD PMID:15687265 RGD:1334449 NCBI chr 3:6,537,645...10,778,823 JBrowse link
Q Ept7 Estrogen-induced pituitary tumorigenesis QTL 7 IDA RGD PMID:17876666 RGD:1642526 NCBI chr 7:62,004,452...101,773,158 JBrowse link
Q Ept9 Estrogen-induced pituitary tumorigenesis QTL 9 IDA RGD PMID:15687265 RGD:1334449 NCBI chr10:73,453,136...96,120,911 JBrowse link
prepulse inhibition trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ppulsi1 Prepulse inhibition QTL 1 IDA RGD PMID:12426667 RGD:629579 NCBI chr 2:136,916,935...213,594,495 JBrowse link
Q Ppulsi2 Prepulse inhibition QTL 2 IDA RGD PMID:12426667 RGD:629579 NCBI chr18:52,292,875...73,997,283 JBrowse link
taste sensitivity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Sach6 Saccharin preference QTL 6 IDA RGD PMID:11958542 RGD:631221 NCBI chr 2:112,456,140...212,696,837 JBrowse link
Q Sach7 Saccharin preference QTL 7 IDA RGD PMID:11958542 RGD:631221 NCBI chr 4:57,114,432...102,114,432 JBrowse link
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  vertebrate trait 1523
    organ system trait 872
      nervous/sensory system trait 115
        nervous system development trait + 0
        nervous system morphology trait + 102
        nervous system physiology trait + 9
        sensory trait + 4
paths to the root