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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:urine mineral amount
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Accession:VT:0015086 term browser browse the term
Definition:The proportion, quantity, or volume in the urine of any inorganic element or compound that has importance in body functions.
Synonyms:xref: ATOL:0001494



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urine mineral amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Uminl1 Urine mineral level QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:28,249,687...73,249,687 JBrowse link
Q Uminl2 Urine mineral level QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:38,783,989...83,783,989 JBrowse link
Q Uminl3 Urine mineral level QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Uminl4 Urine mineral level QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:55,624,247...100,624,247 JBrowse link
Q Uminl5 Urine mineral level QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr19:1...36,824,771 JBrowse link
urine calcium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hc1 Hypercalciuria QTL 1 IDA RGD PMID:12819244 RGD:631855 NCBI chr 1:178,810,256...240,830,002 JBrowse link
Q Hc2 Hypercalciuria QTL 2 IDA RGD PMID:12819244 RGD:631855 NCBI chr 4:210,796...45,210,796 JBrowse link
Q Hc3 Hypercalciuria QTL 3 IDA RGD PMID:12819244 RGD:631855 NCBI chr 7:42,787,314...87,787,314 JBrowse link
Q Hc4 Hypercalciuria QTL 4 IDA RGD PMID:12819244 RGD:631855 NCBI chr10:1...38,328,221 JBrowse link
Q Hc5 Hypercalciuria QTL 5 IDA RGD PMID:12819244 RGD:631855 NCBI chr14:58,184,885...103,184,885 JBrowse link
Q Hc6 Hypercalciuria QTL 6 IDA RGD PMID:16611718 RGD:1582396 NCBI chr 1:203,995,416...244,113,296 JBrowse link
urine potassium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf26 Renal function QTL 26 IDA RGD PMID:14532335 RGD:727992 NCBI chr18:52,539,863...65,844,950 JBrowse link
Q Rf28 Renal function QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:45,803,140...78,430,678 JBrowse link
Q Rf29 Renal function QTL 29 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:35,239,598...78,430,678 JBrowse link
Q Rf30 Renal function QTL 30 IDA RGD PMID:11721057 RGD:70849 NCBI chr 3:39,454,637...89,115,240 JBrowse link
Q Rf31 Renal function QTL 31 IDA RGD PMID:11721057 RGD:70849 NCBI chr 4:39,524,264...74,726,312 JBrowse link
urine sodium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf27 Renal function QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:28,879,780...78,430,678 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2384
    organism trait 936
      homeostasis trait 547
        urine homeostasis trait 111
          urine molecular composition trait 111
            urine mineral amount 18
              urine calcium amount 7
              urine chloride amount 0
              urine phosphate amount 1
              urine potassium amount 5
              urine sodium amount 1
Path 2
Term Annotations click to browse term
  vertebrate trait 2384
    organism trait 936
      homeostasis trait 547
        molecule homeostasis trait 262
          mineral homeostasis trait 23
            mineral amount 23
              urine mineral amount 18
                urine calcium amount 7
                urine chloride amount 0
                urine phosphate amount 1
                urine potassium amount 5
                urine sodium amount 1
paths to the root