Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:vitamin and cofactor metabolism trait
go back to main search page
Accession:VT:0010636 term browser browse the term
Definition:Any measurable or observable characteristic related to the chemical reactions and pathways involving a vitamin (organic substance found in food that is necessary in trace amounts for normal metabolic function) or cofactor (atom or molecule essential for the action of the vitamin).


show annotations for term's descendants           Sort by:
vitamin metabolism trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q GWAS1066499_H pyridoxate measurement QTL GWAS1066499 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 1:182,590,375...182,590,376 JBrowse link
Q GWAS535737_H niacinamide measurement QTL GWAS535737 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31560688 NCBI chr13:84,267,923...84,267,924 JBrowse link
Q GWAS644002_H pyridoxate measurement QTL GWAS644002 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 4:141,754,259...141,754,260 JBrowse link
Q GWAS697194_H pyridoxate measurement QTL GWAS697194 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr17:52,512,264...52,512,265 JBrowse link
Q GWAS697197_H pyridoxate measurement QTL GWAS697197 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 2:137,110,041...137,110,042 JBrowse link
Q GWAS697198_H pyridoxate measurement QTL GWAS697198 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr14:69,758,647...69,758,648 JBrowse link
Q GWAS697501_H pyridoxate measurement QTL GWAS697501 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr10:6,474,129...6,474,130 JBrowse link
Q GWAS697502_H pyridoxate measurement QTL GWAS697502 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 4:76,496,050...76,496,051 JBrowse link
Q GWAS697503_H pyridoxate measurement QTL GWAS697503 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 4:2,453,786...2,453,787 JBrowse link
Q GWAS699117_H niacinamide measurement QTL GWAS699117 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr18:24,206,524...24,206,525 JBrowse link
Q GWAS699118_H niacinamide measurement QTL GWAS699118 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr17:79,331,700...79,331,701 JBrowse link
Q GWAS699121_H niacinamide measurement QTL GWAS699121 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 8:28,346,747...28,346,748 JBrowse link
Q GWAS716405_H pyridoxate measurement QTL GWAS716405 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 6:31,701,808...31,701,809 JBrowse link
Q GWAS716406_H pyridoxate measurement QTL GWAS716406 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 6:31,827,759...31,827,760 JBrowse link
Q GWAS723771_H niacinamide measurement QTL GWAS723771 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31560688 NCBI chr 5:132,773,431...132,773,432 JBrowse link
Q GWAS729466_H pyridoxate measurement QTL GWAS729466 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 1:231,611,204...231,611,205 JBrowse link
Q GWAS738647_H pyridoxate measurement QTL GWAS738647 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr 1:3,035,739...3,035,740 JBrowse link
Q GWAS738648_H pyridoxate measurement QTL GWAS738648 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr 5:27,126,730...27,126,731 JBrowse link
Q GWAS738649_H pyridoxate measurement QTL GWAS738649 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr 7:139,534,334...139,534,335 JBrowse link
Q GWAS744445_H pyridoxate measurement QTL GWAS744445 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr16:49,770,173...49,770,174 JBrowse link
Q GWAS744446_H pyridoxate measurement QTL GWAS744446 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr18:41,782,758...41,782,759 JBrowse link
Q GWAS744454_H pyridoxate measurement QTL GWAS744454 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:36357675 NCBI chr20:39,550,103...39,550,104 JBrowse link
Q GWAS745748_H niacinamide measurement QTL GWAS745748 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 3:175,253,727...175,253,728 JBrowse link
Q GWAS796996_H niacinamide measurement QTL GWAS796996 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 1:171,197,393...171,197,394 JBrowse link
Q GWAS841253_H pyridoxate measurement QTL GWAS841253 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 1:239,620,012...239,620,013 JBrowse link
Q GWAS841254_H pyridoxate measurement QTL GWAS841254 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 1:246,144,977...246,144,978 JBrowse link
Q GWAS841255_H pyridoxate measurement QTL GWAS841255 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr10:119,325,222...119,325,223 JBrowse link
Q GWAS841256_H pyridoxate measurement QTL GWAS841256 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr11:101,718,229...101,718,230 JBrowse link
Q GWAS841539_H pyridoxate measurement QTL GWAS841539 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr12:130,761,827...130,761,828 JBrowse link
Q GWAS841540_H pyridoxate measurement QTL GWAS841540 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr17:3,212,295...3,212,296 JBrowse link
Q GWAS841541_H pyridoxate measurement QTL GWAS841541 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 3:53,510,851...53,510,852 JBrowse link
Q GWAS841542_H pyridoxate measurement QTL GWAS841542 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr 7:10,171,980...10,171,981 JBrowse link
Q GWAS845062_H pyridoxate measurement QTL GWAS845062 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr18:2,909,702...2,909,703 JBrowse link
Q GWAS845352_H pyridoxate measurement QTL GWAS845352 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:31882771 NCBI chr18:59,932,491...59,932,492 JBrowse link
Q GWAS871782_H niacinamide measurement QTL GWAS871782 (human) IAGP Based on the EFO term ID GWAS_CATALOG PMID:23823483 NCBI chr 6:890,039...890,040 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 65034
    organism trait 34425
      metabolism trait 335
        vitamin and cofactor metabolism trait 35
          vitamin metabolism trait + 35
paths to the root