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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:coat/hair pigmentation trait
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Accession:VT:0010463 term browser browse the term
Definition:Any measurable or observable characteristic related to the deposition or aggregation of coloring matter in the fine, keratinized filamentous growths arising from the epidermis of mammals.



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coat/hair pigmentation trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coatc1 Coat color QTL1 IDA RGD PMID:19363126 RGD:2313383 NCBI chr14:18,541,332...63,541,332 JBrowse link
Q Coatc10 Coat color QTL 10 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:7,496,499...52,496,499 JBrowse link
Q Coatc11 Coat color QTL 11 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:17,944,357...62,944,357 JBrowse link
Q Coatc12 Coat color QTL 12 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:31,112,832...76,112,832 JBrowse link
Q Coatc13 Coat color QTL 13 IDA RGD PMID:26796131 RGD:10755346 NCBI chr  X:4,406,000...49,406,000 JBrowse link
Q Coatc14 Coat color QTL 14 IDA RGD PMID:26796131 RGD:10755346 NCBI chr12:1...22,591,684 JBrowse link
Q Coatc15 Coat color QTL 15 IDA RGD PMID:26796131 RGD:10755346 NCBI chr14:19,836,944...64,836,944 JBrowse link
Q Coatc16 Coat color QTL 16 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 3:122,438,700...167,438,700 JBrowse link
Q Coatc2 Coat color QTL 2 IDA RGD PMID:20364790 RGD:2317982 NCBI chr14:30,767,025...39,153,750 JBrowse link
Q Coatc3 Coat color QTL 3 IDA RGD PMID:20364790 RGD:2317982 NCBI chr15:19,856,566...46,187,442 JBrowse link
Q Coatc4 Coat color QTL 4 IDA RGD PMID:20364790 RGD:2317982 NCBI chr17:4,299,130...21,293,263 JBrowse link
Q Coatc5 Coat color QTL 5 IDA RGD PMID:20364790 RGD:2317982 NCBI chr17:31,368,391...73,951,021 JBrowse link
Q Coatc6 Coat color QTL 6 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:11,591,100...56,591,100 JBrowse link
Q Coatc7 Coat color QTL 7 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:30,648,065...75,648,065 JBrowse link
Q Coatc8 Coat color QTL 8 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 2:35,023,117...80,023,117 JBrowse link
Q Coatc9 Coat color QTL 9 IDA RGD PMID:26796131 RGD:10755346 NCBI chr 7:3,529,280...48,529,280 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2379
    organ system trait 1548
      integumentary system trait 24
        integumentary system morphology trait 24
          skin adnexa morphology trait 24
            coat/hair morphology trait 16
              coat/hair pigmentation trait 16
Path 2
Term Annotations click to browse term
  vertebrate trait 2379
    organism subdivision trait 180
      surface structure trait 180
        surface structure morphology trait 180
          integumentary system morphology trait 24
            skin adnexa morphology trait 24
              coat/hair morphology trait 16
                coat/hair pigmentation trait 16
paths to the root