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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:protein amount
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Accession:VT:0010120 term browser browse the term
Definition:The proportion, quantity, or volume in a body tissue or fluid of macromolecules consisting of long sequences of amino acids in peptide linkage.



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blood anti-double stranded DNA antibody amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iresp1 Immunoglobin response QTL1 IDA RGD PMID:10898507 RGD:619646 NCBI chr20:9,039,719...13,461,775 JBrowse link
blood autoantibody amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ciaa1 CIA Autoantibody QTL 1 IDA RGD PMID:11001927 RGD:61067 NCBI chr20:2,646,395...4,597,031 JBrowse link
Q Ciaa2 CIA Autoantibody QTL 2 IDA RGD PMID:10857786 RGD:61066 NCBI chr10:63,221,094...107,211,142 JBrowse link
Q Ciaa3 CIA Autoantibody QTL 3 IDA RGD PMID:10857786 RGD:61066 NCBI chr 9:7,954,720...22,071,169 JBrowse link
Q Ciaa4 CIA Autoantibody QTL 4 IDA RGD PMID:11001927 RGD:61067 NCBI chr 4:126,395,976...167,139,601 JBrowse link
Q Ciaa5 CIA Autoantibody QTL 5 IDA RGD PMID:11001927 RGD:61067 NCBI chr 5:94,858,972...143,070,159 JBrowse link
Q Pia28 Pristane induced arthritis QTL 28 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 4:73,630,210...118,630,210 JBrowse link
Q Pia29 Pristane induced arthritis QTL 29 IDA RGD PMID:14674011 RGD:2302026 NCBI chr16:21,735,975...66,735,975 JBrowse link
Q Pia30 Pristane induced arthritis QTL 30 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 3:27,936,919...72,936,919 JBrowse link
Q Pia31 Pristane induced arthritis QTL 31 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 1:10,992,065...55,992,065 JBrowse link
Q Pia32 Pristane induced arthritis QTL 32 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 4:105,789,505...150,789,505 JBrowse link
blood immunoglobulin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pia27 Pristane induced arthritis QTL 27 IDA RGD PMID:14674011 RGD:2302026 NCBI chr11:82,566,545...83,440,803 JBrowse link
Q Pia33 Pristane induced arthritis QTL 33 IDA RGD PMID:14674011 RGD:2302026
Q Pia34 Pristane induced arthritis QTL 34 IDA RGD PMID:14674011 RGD:2302026
Q Pia35 Pristane induced arthritis QTL 35 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 1:216,255,568...260,522,016 JBrowse link
Q Pia36 Pristane induced arthritis QTL 36 IDA RGD PMID:14674011 RGD:2302026 NCBI chr 1:43,333,002...88,333,002 JBrowse link
Q Pia37 Pristane induced arthritis QTL 37 IDA RGD PMID:14674011 RGD:2302026 NCBI chr12:13,198,157...46,669,029 JBrowse link
Q Pia38 Pristane induced arthritis QTL 38 IDA RGD PMID:14674011 RGD:2302026 NCBI chr12:1...44,503,507 JBrowse link
Q Pia39 Pristane induced arthritis QTL 39 IDA RGD PMID:14674011 RGD:2302026 NCBI chr14:8,267,090...53,267,090 JBrowse link
blood immunoglobulin E amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iresp2 Immunoglobin response QTL2 IDA RGD PMID:10898507 RGD:619646 NCBI chr10:22,918,268...36,400,810 JBrowse link
Q Iresp3 Immunoglobin response QTL3 IDA RGD PMID:10898507 RGD:619646 NCBI chr 9:2,745,799...5,857,951 JBrowse link
blood interleukin-6 amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Apr3 Acute phase response QTL 3 IDA RGD PMID:11817600 RGD:629561 NCBI chr10:15,275,955...60,275,955 JBrowse link
Q Apr5 Acute phase response QTL 5 IDA RGD PMID:11817600 RGD:629561 NCBI chr12:1...44,503,507 JBrowse link
Q Apr6 Acute phase response QTL 6 IDA RGD PMID:11817600 RGD:629561 NCBI chr14:1...41,131,407 JBrowse link
blood murinoglobulin 1 amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Apr2 Acute phase response QTL 2 IDA RGD PMID:11817600 RGD:629561 NCBI chr 5:135,927,956...166,875,058 JBrowse link
blood total protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Sprol1 Serum protein level QTL 1 IDA RGD PMID:9199194 RGD:61055 NCBI chr18:31,393,320...77,209,694 JBrowse link
blood tumor necrosis factor amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Eae35 Experimental allergic encephalomyelitis QTL 35 IDA RGD PMID:24312603 RGD:8662358 NCBI chr 4:100,834,579...103,761,084 JBrowse link
orosomucoid 1 amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Apr1 Acute phase response QTL 1 IDA RGD PMID:11817600 RGD:629561 NCBI chr12:19,144,362...46,669,029 JBrowse link
Q Apr4 Acute phase response QTL 4 IDA RGD PMID:11817600 RGD:629561 NCBI chr12:1,172,005...46,172,005 JBrowse link
total urine protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur1 Proteinuria QTL 1 IDA RGD PMID:9799838 RGD:619599 NCBI chr13:34,535,218...37,415,726 JBrowse link
Q Pur12 Proteinuria QTL 12 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 2:112,103,657...148,076,632 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 3:78,196,190...146,592,722 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA RGD PMID:16390874 RGD:1578625 NCBI chr17:7,979,968...16,317,111 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA RGD PMID:16390874 RGD:1578625 NCBI chr20:8,042,410...17,617,956 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA RGD PMID:18064521 RGD:2292230 NCBI chr13:36,155,723...41,961,389 JBrowse link
Q Pur18 Proteinuria QTL 18 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 5:2,138,965...32,656,739 JBrowse link
Q Pur19 Proteinuria QTL 19 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 4:65,882,107...96,130,297 JBrowse link
Q Pur20 Proteinuria QTL 20 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 6:125,628,133...137,801,795 JBrowse link
Q Pur24 Proteinuria QTL 24 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 2:184,114,274...202,447,032 JBrowse link
Q Pur25 Proteinuria QTL 25 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 6:56,728,562...90,198,260 JBrowse link
Q Pur26 Proteinuria QTL 26 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 9:77,813,894...101,597,663 JBrowse link
Q Pur27 Proteinuria QTL 27 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:4,606,607...17,617,956 JBrowse link
Q Pur28 Proteinuria QTL 28 IDA RGD PMID:20876844 RGD:4889613 NCBI chr11:45,459,323...75,190,161 JBrowse link
Q Pur29 Proteinuria QTL 29 IDA RGD PMID:20876844 RGD:4889613 NCBI chr13:37,415,584...80,753,406 JBrowse link
Q Pur30 Proteinuria QTL 30 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:8,042,410...29,322,208 JBrowse link
Q Pur31 Proteinuria QTL 31 IDA RGD PMID:21814219 RGD:6903249 NCBI chr 9:40,194,188...85,194,188 JBrowse link
Q Pur32 Proteinuria QTL 32 IDA RGD PMID:24192394 RGD:8552897 NCBI chr13:74,023,918...97,213,863 JBrowse link
Q Pur33 Proteinuria QTL 33 IDA RGD PMID:27113531 RGD:11353859 NCBI chr 9:44,649,921...89,649,921 JBrowse link
Q Pur4 Proteinuria QTL 4 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:150,700,247...252,085,048 JBrowse link
Q Pur5 Proteinuria QTL 5 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:30,848,154...101,699,754 JBrowse link
Q Pur6 Proteinuria QTL 6 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:62,072,275...96,470,995 JBrowse link
Q Pur7 Proteinuria QTL 7 IDA RGD PMID:16534143 RGD:1578520
Q Pur8 Proteinuria QTL 8 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:72,227,641...130,729,205 JBrowse link
Q Rf4 Renal disease susceptibility QTL 4 IDA RGD PMID:11053483 RGD:70856 NCBI chr14:1...32,754,612 JBrowse link
Q Rf44 Renal function QTL 44 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:18,234,564...31,359,530 JBrowse link
Q Rf5 Renal disease susceptibility QTL 5 IDA RGD PMID:11053483 RGD:70856
Q Rf52 Renal function QTL 52 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 1:232,156,370...259,647,894 JBrowse link
Q Rf53 Renal function QTL 53 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 3:56,395,968...161,299,569 JBrowse link
urine albumin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur10 Proteinuria QTL 10 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:44,803,318...82,846,466 JBrowse link
Q Pur11 Proteinuria QTL 11 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:5,994,833...77,046,787 JBrowse link
Q Rf3 Renal disease susceptibility QTL 3 IDA RGD PMID:11053483 RGD:70856 NCBI chr 3:107,693,393...152,693,393 JBrowse link
Q Rf59 Renal function QTL 59 IDA RGD PMID:21127141 RGD:5684423 NCBI chr 3:140,069,424...146,976,080 JBrowse link
Q Uae1 Urinary albumin excretion QTL 1 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:90,508,614...173,018,436 JBrowse link
Q Uae10 Urinary albumin excretion QTL 10 IDA RGD PMID:12707388 RGD:634617 NCBI chr11:27,672,410...82,846,715 JBrowse link
Q Uae11 Urinary albumin excretion QTL 11 IDA RGD PMID:12707388 RGD:634617 NCBI chr13:59,492,522...77,046,890 JBrowse link
Q Uae12 Urinary albumin excretion QTL 12 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:2,187,927...56,457,239 JBrowse link
Q Uae13 Urinary albumin excretion QTL 13 IDA RGD PMID:12799471 RGD:634633 NCBI chr 2:143,157,029...210,020,885 JBrowse link
Q Uae14 Urinary albumin excretion QTL 14 IDA RGD PMID:12799471 RGD:634633 NCBI chr 6:85,311,061...133,478,515 JBrowse link
Q Uae15 Urinary albumin excretion QTL 15 IDA RGD PMID:12799471 RGD:634633 NCBI chr 8:29,502,665...70,386,295 JBrowse link
Q Uae16 Urinary albumin excretion QTL 16 IDA RGD PMID:12799471 RGD:634633 NCBI chr 9:58,163,035...100,929,646 JBrowse link
Q Uae17 Urinary albumin excretion QTL 17 IDA RGD PMID:12799471 RGD:634633 NCBI chr10:78,210,622...85,220,348 JBrowse link
Q Uae18 Urinary albumin excretion QTL 18 IDA RGD PMID:12799471 RGD:634633 NCBI chr11:16,472,047...44,285,911 JBrowse link
Q Uae19 Urinary albumin excretion QTL 19 IDA RGD PMID:12799471 RGD:634633 NCBI chr19:7,457,249...42,983,518 JBrowse link
Q Uae2 Urinary albumin excretion QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 6:73,463,459...109,394,713 JBrowse link
Q Uae20 Urinary albumin excretion QTL 20 IDA RGD PMID:14638907 RGD:730279 NCBI chr 1:221,264,111...259,647,894 JBrowse link
Q Uae21 Urinary albumin excretion QTL 21 IDA RGD PMID:14638907 RGD:730279 NCBI chr 4:106,649,412...151,649,412 JBrowse link
Q Uae22 Urinary albumin excretion QTL 22 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:65,531,555...140,994,061 JBrowse link
Q Uae23 Urinary albumin excretion QTL 23 IDA RGD PMID:14638907 RGD:730279 NCBI chr 7:104,603,555...135,012,528 JBrowse link
Q Uae24 Urinary albumin excretion QTL 24 IDA RGD PMID:14638907 RGD:730279 NCBI chr 8:19,331,152...93,965,294 JBrowse link
Q Uae25 Urinary albumin excretion QTL 25 IDA RGD PMID:14638907 RGD:730279 NCBI chr 9:25,661,188...100,929,786 JBrowse link
Q Uae26 Urinary albumin excretion QTL 26 IDA RGD PMID:14638907 RGD:730279 NCBI chr15:67,588,667...101,769,107 JBrowse link
Q Uae27 Urinary albumin excretion QTL 27 IDA RGD PMID:14638907 RGD:730279 NCBI chr  X:1...43,491,017 JBrowse link
Q Uae28 Urinary albumin excretion QTL 28 IDA RGD PMID:15161966 RGD:1300043 NCBI chr 6:1...34,235,784 JBrowse link
Q Uae29 Urinary albumin excretion QTL 29 IDA RGD PMID:15161966 RGD:1300043 NCBI chr19:4,096,155...55,283,277 JBrowse link
Q Uae3 Urinary albumin excretion QTL 3 IDA RGD PMID:12397040 RGD:634618 NCBI chr12:3,906,969...10,373,166 JBrowse link
Q Uae30 Urinary albumin excretion QTL 30 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:150,700,247...252,085,048 JBrowse link
Q Uae31 Urinary albumin excretion QTL 31 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:30,848,154...101,699,754 JBrowse link
Q Uae33 Urinary albumin excretion QTL 33 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:72,227,641...130,729,205 JBrowse link
Q Uae34 Urinary albumin excretion QTL 34 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:62,072,275...96,470,995 JBrowse link
Q Uae35 Urinary albumin excretion QTL 35 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:44,803,318...82,846,466 JBrowse link
Q Uae36 Urinary albumin excretion QTL 36 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:5,994,833...77,046,787 JBrowse link
Q Uae37 Urinary albumin excretion QTL 37 IDA RGD PMID:17953514 RGD:1642911 NCBI chr 6:65,531,555...140,994,061 JBrowse link
Q Uae39 Urinary albumin excretion QTL 39 IDA RGD PMID:16534143 RGD:1578520 NCBI chr19:2,187,927...46,708,701 JBrowse link
Q Uae4 Urinary albumin excretion QTL 4 IDA RGD PMID:12397040 RGD:634618 NCBI chr17:35,837,085...69,599,340 JBrowse link
Q Uae40 Urinary albumin excretion QTL 40 IDA RGD PMID:20159938 RGD:7365117
Q Uae41 Urinary albumin excretion QTL 41 IDA RGD PMID:20159938 RGD:7365117
Q Uae42 Urinary albumin excretion QTL 42 IDA RGD PMID:20159938 RGD:7365117
Q Uae43 Urinary albumin excretion QTL 43 IDA RGD PMID:20159938 RGD:7365117
Q Uae44 Urinary albumin excretion QTL 44 IDA RGD PMID:20159938 RGD:7365117
Q Uae45 Urinary albumin excretion QTL 45 IDA RGD PMID:20159938 RGD:7365117
Q Uae46 Urinary albumin excretion QTL 46 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Uae5 Urinary albumin excretion QTL 5 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:150,700,142...252,085,212 JBrowse link
Q Uae6 Urinary albumin excretion QTL 6 IDA RGD PMID:12707388 RGD:634617 NCBI chr 2:78,665,619...249,053,267 JBrowse link
Q Uae7 Urinary albumin excretion QTL 7 IDA RGD PMID:12707388 RGD:634617 NCBI chr 6:72,202,632...130,729,475 JBrowse link
Q Uae8 Urinary albumin excretion QTL 8 IDA RGD PMID:12707388 RGD:634617 NCBI chr 8:28,157,323...30,848,259 JBrowse link
Q Uae9 Urinary albumin excretion QTL 9 IDA RGD PMID:12707388 RGD:634617 NCBI chr 9:25,268,044...114,175,309 JBrowse link
urine protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom22 Glomerulus QTL 22 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 1:11,481,482...32,355,910 JBrowse link
Q Glom23 Glomerulus QTL 23 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 2:193,452,645...245,889,826 JBrowse link
Q Glom25 Glomerulus QTL 25 IDA RGD PMID:16482158 RGD:2293335 NCBI chr10:82,685,200...107,211,142 JBrowse link
Q Glom26 Glomerulus QTL 26 IDA RGD PMID:16482158 RGD:2293335 NCBI chr15:12,496,141...65,205,939 JBrowse link
Q Pur17 Proteinuria QTL 17 IDA RGD PMID:19448344 RGD:2312387 NCBI chr 1:156,677,124...218,753,816 JBrowse link
Q Pur2 Proteinuria QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr10:22,427,500...90,627,625 JBrowse link
Q Pur21 Proteinuria QTL 21 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 5:59,793,528...113,558,156 JBrowse link
Q Pur22 Proteinuria QTL 22 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 7:68,938,720...113,886,318 JBrowse link
Q Pur3 Proteinuria QTL 3 IDA RGD PMID:14638907 RGD:730279 NCBI chr15:1...41,686,771 JBrowse link
Q Rf1 Renal disease susceptibility QTL 1 IDA RGD PMID:8528250 RGD:61060
Q Rf2 Renal disease susceptibility QTL 2 IDA RGD PMID:8528250 RGD:61060 NCBI chr 1:99,267,916...144,267,916 JBrowse link
Q Uae32 Urinary albumin excretion QTL 32 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 2:78,665,619...219,826,953 JBrowse link

Term paths to the root
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  vertebrate trait 1523
    organism trait 752
      homeostasis trait 363
        molecule homeostasis trait 201
          protein amount 118
            blood protein amount + 29
            tissue protein amount 0
            troponin T amount 0
            urine protein amount + 89
paths to the root