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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:kidney morphology trait
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Accession:VT:0002135 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color, or pattern of the paired organs responsible for urine excretion and regulation of ion concentrations.
Comment:pslim term
Synonyms:exact_synonym: renal morphology trait



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kidney morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Klgr1 Kidney lesion grade QTL 1 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:30,848,154...101,699,754 JBrowse link
kidney blood vessel morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
kidney glomerulus integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom15 Glomerulus QTL 15 IDA RGD PMID:16482158 RGD:2293335 NCBI chr13:74,862,117...101,339,893 JBrowse link
Q Glom16 Glomerulus QTL 16 IDA RGD PMID:16482158 RGD:2293335 NCBI chr16:832,236...46,053,497 JBrowse link
Q Glom24 Glomerulus QTL 24 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 5:97,570,330...136,479,578 JBrowse link
Q Glom27 Glomerulus QTL 27 IDA RGD PMID:22445570 RGD:7207870 NCBI chr13:20,605,871...101,339,738 JBrowse link
Q Rends1 Renal damage susceptibility QTL 1 IDA RGD PMID:10454439 RGD:632218 NCBI chr 1:169,537,671...214,537,671 JBrowse link
Q Rf20 Renal function QTL 20 IDA RGD PMID:14532335 RGD:727992 NCBI chr11:29,528,418...60,324,829 JBrowse link
Q Rf9 Renal function QTL 9 IDA RGD PMID:14532335 RGD:727992 NCBI chr 2:133,914,684...202,447,032 JBrowse link
kidney glomerulus morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom1 Glomerulus QTL 1 IDA RGD PMID:12397040 RGD:634618 NCBI chr  X:75,294,106...120,294,106 JBrowse link
Q Glom10 Glomerulus QTL 10 IDA RGD PMID:16720678 RGD:1581737 NCBI chr11:1...35,331,169 JBrowse link
Q Glom11 Glomerulus QTL 11 IDA RGD PMID:16720678 RGD:1581737
Q Glom12 Glomerulus QTL 12 IDA RGD PMID:16720678 RGD:1581737 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Glom13 Glomerulus QTL 13 IDA RGD PMID:16720678 RGD:1581737
Q Glom14 Glomerulus QTL 14 IDA RGD PMID:16720678 RGD:1581737 NCBI chr15:34,054,139...79,054,139 JBrowse link
Q Glom17 Glomerulus QTL 17 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 1:166,532,971...191,278,129 JBrowse link
Q Glom18 Glomerulus QTL 18 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 1:185,356,336...231,689,108 JBrowse link
Q Glom19 Glomerulus QTL 19 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 4:45,456,990...146,803,430 JBrowse link
Q Glom2 Glomerulus QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:222,363,780...260,522,016 JBrowse link
Q Glom20 Glomerulus QTL 20 IDA RGD PMID:18682577 RGD:2312422 NCBI chr11:44,285,759...82,566,702 JBrowse link
Q Glom21 Glomerulus QTL 21 IDA RGD PMID:18682577 RGD:2312422 NCBI chr18:5,185,858...40,503,530 JBrowse link
Q Glom3 Glomerulus QTL 3 IDA RGD PMID:12397040 RGD:634618
Q Glom4 Glomerulus QTL 4 IDA RGD PMID:14638907 RGD:730279 NCBI chr 2:20,304,672...65,304,672 JBrowse link
Q Glom5 Glomerulus QTL 5 IDA RGD PMID:14638907 RGD:730279 NCBI chr 7:96,670,164...135,012,528 JBrowse link
Q Glom6 Glomerulus QTL 6 IDA RGD PMID:14638907 RGD:730279 NCBI chr 9:64,573,531...109,573,531 JBrowse link
Q Glom7 Glomerulus QTL 7 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:71,201,409...116,201,409 JBrowse link
Q Glom8 Glomerulus QTL 8 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:86,894,788...131,894,788 JBrowse link
Q Glom9 Glomerulus QTL 9 IDA RGD PMID:16720678 RGD:1581737 NCBI chr 2:92,337,601...137,337,601 JBrowse link
Q Rf57 Renal function QTL 57 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 5:59,793,528...90,450,144 JBrowse link
Q Rf58 Renal function QTL 58 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 7:68,938,720...113,886,318 JBrowse link
kidney mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coreg1 Compensatory renal growth QTL 1 IDA RGD PMID:10732705 RGD:69708 NCBI chr 6:35,691,618...57,730,540 JBrowse link
Q Coreg2 Compensatory renal growth QTL 2 IDA RGD PMID:10864582 RGD:61071 NCBI chr 4:148,423,102...157,580,971 JBrowse link
Q Kidm1 Kidney mass QTL 1 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:213,707,201...252,085,212 JBrowse link
Q Kidm10 Kidney mass QTL 10 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...125,221,299 JBrowse link
Q Kidm11 Kidney mass QTL 11 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:11,073,825...24,234,895 JBrowse link
Q Kidm12 Kidney mass QTL 12 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm13 Kidney mass QTL 13 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 3:41,874,578...104,104,347 JBrowse link
Q Kidm14 Kidney mass QTL 14 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...35,837,242 JBrowse link
Q Kidm15 Kidney mass QTL 15 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:156,677,124...201,278,233 JBrowse link
Q Kidm16 Kidney mass QTL 16 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...222,436,696 JBrowse link
Q Kidm17 Kidney mass QTL 17 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...227,146,641 JBrowse link
Q Kidm18 Kidney mass QTL 18 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...256,448,636 JBrowse link
Q Kidm19 Kidney mass QTL 19 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm2 Kidney mass QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr18:59,172,115...83,828,827 JBrowse link
Q Kidm20 Kidney mass QTL 20 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 1:177,227,632...256,448,636 JBrowse link
Q Kidm21 Kidney mass QTL 21 IDA RGD PMID:15452030 RGD:1302893 NCBI chr10:15,028,513...60,430,477 JBrowse link
Q Kidm22 Kidney mass QTL 22 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 1:210,702,053...240,947,965 JBrowse link
Q Kidm23 Kidney mass QTL 23 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm24 Kidney mass QTL 24 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm25 Kidney mass QTL 25 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 5:90,067,849...128,034,027 JBrowse link
Q Kidm26 Kidney mass QTL 26 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 8:27,205,715...99,103,503 JBrowse link
Q Kidm27 Kidney mass QTL 27 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm28 Kidney mass QTL 28 IDA RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm29 Kidney mass QTL 29 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:179,567,751...260,522,016 JBrowse link
Q Kidm3 Kidney mass QTL 3 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:29,322,490...57,337,602 JBrowse link
Q Kidm30 Kidney mass QTL 30 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:64,655,305...115,665,732 JBrowse link
Q Kidm31 Kidney mass QTL 31 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:54,237,644...85,365,202 JBrowse link
Q Kidm32 Kidney mass QTL 32 IDA RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Kidm33 Kidney mass QTL 33 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 1:188,377,360...224,054,420 JBrowse link
Q Kidm34 Kidney mass QTL 34 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 4:148,090,542...168,069,246 JBrowse link
Q Kidm35 Kidney mass QTL 35 IDA RGD PMID:16700878 RGD:1626643 NCBI chr 1:199,368,955...224,569,684 JBrowse link
Q Kidm36 Kidney mass QTL 36 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:190,613,715...226,808,892 JBrowse link
Q Kidm37 Kidney mass QTL 37 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:70,653,097...121,056,321 JBrowse link
Q Kidm38 Kidney mass QTL 38 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:84,007,272...95,933,025 JBrowse link
Q Kidm39 Kidney mass QTL 39 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:2,851,709...15,884,239 JBrowse link
Q Kidm4 Kidney mass QTL 4 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:121,056,165...157,309,487 JBrowse link
Q Kidm40 Kidney mass QTL 40 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:37,479,847...82,479,847 JBrowse link
Q Kidm41 Kidney mass QTL 41 IDA RGD PMID:19448344 RGD:2312387 NCBI chr12:1...19,611,090 JBrowse link
Q Kidm42 Kidney mass QTL 42 IDA RGD PMID:20159938 RGD:7365117
Q Kidm43 Kidney mass QTL 43 IDA RGD PMID:24192394 RGD:8552897 NCBI chr 4:36,303,261...103,194,984 JBrowse link
Q Kidm44 Kidney mass QTL 44 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 1:191,033,875...236,033,875 JBrowse link
Q Kidm45 Kidney mass QTL 45 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:7,573,985...52,573,985 JBrowse link
Q Kidm46 Kidney mass QTL 46 IDA RGD PMID:25707311 RGD:10045846 NCBI chr12:6,107,579...46,669,029 JBrowse link
Q Kidm47 Kidney mass QTL 47 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 7:47,251,783...65,728,867 JBrowse link
Q Kidm48 Kidney mass QTL 48 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 4:145,568,712...182,687,754 JBrowse link
Q Kidm49 Kidney mass QTL 49 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
Q Kidm5 Kidney mass QTL 5 IDA RGD PMID:14532335 RGD:727992 NCBI chr 7:43,747,012...135,012,528 JBrowse link
Q Kidm50 Kidney mass QTL 50 IDA RGD PMID:25707311 RGD:10045846 NCBI chr10:418,344...45,418,344 JBrowse link
Q Kidm51 Kidney mass QTL 51 IDA RGD PMID:25707311 RGD:10045846 NCBI chr15:306,329...45,306,329 JBrowse link
Q Kidm52 Kidney mass QTL 52 IDA RGD PMID:25707311 RGD:10045846 NCBI chr17:1...31,701,463 JBrowse link
Q Kidm53 Kidney mass QTL 53 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 3:8,227,194...47,233,430 JBrowse link
Q Kidm54 Kidney mass QTL 54 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
Q Kidm55 Kidney mass QTL 55 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 7:70,840,118...72,474,897 JBrowse link
Q Kidm56 Kidney mass QTL 56 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...175,950,118 JBrowse link
Q Kidm57 Kidney mass QTL 57 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:31,426,403...70,668,733 JBrowse link
Q Kidm58 Kidney mass QTL 58 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...67,750,281 JBrowse link
Q Kidm59 Kidney mass QTL 59 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:6,791,251...12,205,285 JBrowse link
Q Kidm6 Kidney mass QTL 6 IDA RGD PMID:14532335 RGD:727992 NCBI chr13:69,060,519...86,800,898 JBrowse link
Q Kidm60 Kidney mass QTL 60 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:137,219,876...142,323,610 JBrowse link
Q Kidm61 Kidney mass QTL 61 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...185,122,374 JBrowse link
Q Kidm62 Kidney mass QTL 62 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:142,323,368...146,786,035 JBrowse link
Q Kidm63 Kidney mass QTL 63 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:18,311,454...47,233,430 JBrowse link
Q Kidm64 Kidney mass QTL 64 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:145,925,360...166,177,555 JBrowse link
Q Kidm65 Kidney mass QTL 65 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:43,296,169...98,968,765 JBrowse link
Q Kidm66 Kidney mass QTL 66 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...68,164,786 JBrowse link
Q Kidm67 Kidney mass QTL 67 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:90,404,397...107,211,142 JBrowse link
Q Kidm68 Kidney mass QTL 68 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:71,115,217...72,606,468 JBrowse link
Q Kidm69 Kidney mass QTL 69 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:832,380...4,227,609 JBrowse link
Q Kidm7 Kidney mass QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr15:82,262,520...98,288,169 JBrowse link
Q Kidm70 Kidney mass QTL 70 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:23,653,184...70,974,005 JBrowse link
Q Kidm71 Kidney mass QTL 71 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:52,539,763...76,104,388 JBrowse link
Q Kidm72 Kidney mass QTL 72 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:26,548,082...46,969,551 JBrowse link
Q Kidm73 Kidney mass QTL 73 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:11,944,273...26,548,295 JBrowse link
Q Kidm8 Kidney mass QTL 8 IDA RGD PMID:9097967 RGD:629573 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Kidm9 Kidney mass QTL 9 IDA RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...112,308,525 JBrowse link
kidney pelvis morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kiddil1 Kidney dilation QTL 1 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 6:81,132,889...104,393,926 JBrowse link
Q Kiddil2 Kidney dilation QTL 2 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 6:20,866,422...81,133,036 JBrowse link
Q Kiddil3 Kidney dilation QTL 3 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 6:81,132,889...104,393,926 JBrowse link
Q Kiddil4 Kidney dilation QTL 4 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 6:20,866,422...81,133,036 JBrowse link
Q Kiddil5 Kidney dilation QTL 5 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 2:42,804,607...157,142,209 JBrowse link
Q Kiddil6 Kidney dilation QTL 6 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 2:42,804,607...182,042,367 JBrowse link
Q Kiddil7 Kidney dilation QTL 7 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 2:219,753,301...247,136,170 JBrowse link
Q Kiddil8 Kidney dilation QTL 8 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 2:219,753,301...247,136,170 JBrowse link
Q Kiddil9 Kidney dilation QTL 9 IDA RGD PMID:18523158 RGD:2293631 NCBI chr 4:120,926,564...148,090,731 JBrowse link
kidney renin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf47 Renal function QTL 47 IDA RGD PMID:15452030 RGD:1302893 NCBI chr13:30,395,351...101,056,920 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  vertebrate trait 1500
    organ system trait 671
      urinary system trait 115
        urinary system morphology trait 109
          kidney morphology trait 109
            kidney blood vessel morphology trait + 3
            kidney cell quantity 0
            kidney cortex morphology trait + 21
            kidney integrity trait + 0
            kidney medulla morphology trait + 0
            kidney molecular composition trait + 1
            kidney pelvis morphology trait + 9
            kidney shape trait 0
            kidney size trait + 75
            nephron morphology trait + 21
paths to the root