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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:blood vessel morphology trait
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Accession:VT:0001614 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the tubular channels through which the blood circulates.
Synonyms:related_synonym: vascular morphology trait


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aorta elastic tissue integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf1 Vascular elastic tissue fragility QTL 1 IDA RGD PMID:11526202 RGD:619605 NCBI chr 5:1,666,587...5,533,324 JBrowse link
Q Vetf2 Vascular elastic tissue fragility QTL 2 IDA RGD PMID:11526202 RGD:619605 NCBI chr10:36,185,929...95,845,311 JBrowse link
aorta elastin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ael1 Aortic elastin QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr 2:19,016,465...64,016,465 JBrowse link
Q Ael2 Aortic elastin QTL 2 IDA RGD PMID:15668357 RGD:1334448
Q Ael3 Aortic elastin QTL 3 IDA RGD PMID:15668357 RGD:1334448 NCBI chr14:10,539,977...55,539,977 JBrowse link
Q Vetf7 Vascular elastic tissue fragility QTL 7 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:83,754,907...237,610,852 JBrowse link
aorta mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Am1 Aortic mass QTL 1 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:142,355,464...148,295,508 JBrowse link
Q Am10 Aortic mass QTL 10 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:77,055,741...86,962,563 JBrowse link
Q Am11 Aortic mass QTL 11 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:86,962,563...99,303,173 JBrowse link
Q Am12 Aortic mass QTL 12 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:68,697,928...70,581,793 JBrowse link
Q Am13 Aortic mass QTL 13 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:93,662,786...112,626,471 JBrowse link
Q Am14 Aortic mass QTL 14 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:73,727,917...75,099,909 JBrowse link
Q Am15 Aortic mass QTL 15 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:68,697,928...70,167,191 JBrowse link
Q Am16 Aortic mass QTL 16 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:1,550,330...3,439,525 JBrowse link
Q Am17 Aortic mass QTL 17 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:21,490,950...66,490,950 JBrowse link
Q Am18 Aortic mass QTL 18 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:54,108,375...79,575,348 JBrowse link
Q Am19 Aortic mass QTL 19 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:27,743,024...48,499,517 JBrowse link
Q Am2 Aortic mass QTL 2 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:172,795,683...199,696,953 JBrowse link
Q Am20 Aortic mass QTL 20 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:15,539,551...27,743,236 JBrowse link
Q Am21 Aortic mass QTL 21 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:7,057,769...15,274,626 JBrowse link
Q Am3 Aortic mass QTL 3 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:27,161,361...148,295,267 JBrowse link
Q Am4 Aortic mass QTL 4 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:172,795,683...189,857,032 JBrowse link
Q Am5 Aortic mass QTL 5 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:14,090,411...48,562,146 JBrowse link
Q Am6 Aortic mass QTL 6 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:31,103,589...72,989,078 JBrowse link
Q Am7 Aortic mass QTL 7 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:153,381,237...174,632,112 JBrowse link
Q Am8 Aortic mass QTL 8 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:47,200,750...106,394,378 JBrowse link
Q Am9 Aortic mass QTL 9 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:2,108,128...47,108,128 JBrowse link
Q Cm7 Cardiac mass QTL 7 IDA RGD PMID:12775577 RGD:629621 NCBI chr 1:216,324,817...261,324,817 JBrowse link
Q Cm8 Cardiac mass QTL 8 IDA RGD PMID:12775577 RGD:629621 NCBI chr 3:18,023,664...63,023,664 JBrowse link
Q Cm9 Cardiac mass QTL 9 IDA RGD PMID:12775577 RGD:629621 NCBI chr19:1...29,558,305 JBrowse link
aorta morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cardf1 Cardiac cell morphology QTL 1 IDA RGD PMID:14532335 RGD:727992 NCBI chr13:14,441,582...50,799,665 JBrowse link
artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf10 Vascular elastic tissue fragility QTL 10 IDA RGD PMID:17356016 RGD:8662443 NCBI chr10:6,229,095...75,983,805 JBrowse link
Q Vetf3 Vascular elastic tissue fragility QTL 3 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 5:1,666,587...71,552,720 JBrowse link
Q Vetf5 Vascular elastic tissue fragility QTL 5 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 8:30,918,112...107,206,309 JBrowse link
Q Vetf6 Vascular elastic tissue fragility QTL 6 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 9:41,261,034...98,606,834 JBrowse link
artery morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vnigr1 Vascular neointimal growth QTL 1 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:156,381,661...176,418,101 JBrowse link
Q Vnigr2 Vascular neointimal growth QTL 2 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:138,374,177...177,699,992 JBrowse link
Q Vnigr3 Vascular neointimal growth QTL 3 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:138,374,177...177,699,992 JBrowse link
blood vessel smooth muscle cell quantity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Smcn1 Smooth muscle cell number QTL 1 IDA RGD PMID:15741507 RGD:1357419 NCBI chr 2:60,131,410...135,646,395 JBrowse link
kidney blood vessel morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:20,341,560...58,000,154 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:82,675,233...88,141,097 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...27,556,253 JBrowse link
renal artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf4 Vascular elastic tissue fragility QTL 4 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 3:61,241,033...165,369,047 JBrowse link
thoracic aorta cellular protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr17:44,356,157...89,356,157 JBrowse link
thoracic aorta molecular composition trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf8 Vascular elastic tissue fragility QTL 8 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:110,965,721...155,965,721 JBrowse link
Q Vetf9 Vascular elastic tissue fragility QTL 9 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:169,852,670...243,026,643 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  vertebrate trait 2379
    organ system trait 1548
      circulatory system trait 606
        circulatory system morphology trait 177
          cardiovascular system morphology trait 177
            blood vessel morphology trait 46
              artery morphology trait + 42
              blood vessel elastic tissue morphology trait + 6
              blood vessel endothelial cell morphology trait + 0
              blood vessel smooth muscle morphology trait + 1
              blood-brain barrier morphology trait 0
              blood-cerebrospinal fluid barrier morphology trait 0
              capillary morphology trait + 0
              cerebrovascular system morphology trait + 0
              choroid blood vessel morphology trait 0
              conjunctival blood vessel morphology trait 0
              kidney blood vessel morphology trait 3
              lung blood vessel morphology trait + 0
              perivascular macrophage morphology trait 0
              retina blood vessel morphology trait 0
              stria vascularis blood vessel morphology trait 0
              vein morphology trait + 0
paths to the root