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ONTOLOGY REPORT - ANNOTATIONS


Term:femur morphology trait
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Accession:VT:0000559 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color, or pattern of the long bone of the thigh.


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femur morphology trait term browser
Symbol Object Name JBrowse Chr Start Stop Reference
Q Bss10 Bone structure and strength QTL 10 JBrowse link 1 49,578,577 169,852,184 RGD:1578307
Q Bss11 Bone structure and strength QTL 11 JBrowse link 2 118,446,646 227,707,979 RGD:1578307
Q Bss111 Bone structure and strength QTL 111 JBrowse link 2 228,712,271 266,435,125 RGD:1549683
Q Bss112 Bone structure and strength QTL 112 JBrowse link 5 112,279,412 157,279,412 RGD:1549683
Q Bss113 Bone structure and strength QTL 113 JBrowse link 3 12,236,221 15,217,668 RGD:11528619
Q Bss115 Bone structure and strength QTL 115 JBrowse link 8 87,295,037 88,257,646 RGD:11528619
Q Bss116 Bone structure and strength QTL 116 JBrowse link 10 45,114,283 45,744,081 RGD:11528619
Q Bss12 Bone structure and strength QTL 12 JBrowse link 4 56,092,756 101,092,756 RGD:1578307
Q Bss120 Bone structure and strength QTL 120 JBrowse link 17 81,940,459 82,621,764 RGD:11528619
Q Bss121 Bone structure and strength QTL 121 JBrowse link 20 35,276,651 37,867,728 RGD:11528619
Q Bss14 Bone structure and strength QTL 14 JBrowse link 4 87,136,446 132,136,446 RGD:1578307
Q Bss16 Bone structure and strength QTL 16 JBrowse link 6 6,161,722 76,002,731 RGD:1578307
Q Bss17 Bone structure and strength QTL 17 JBrowse link 9 1,907,834 15,555,026 RGD:1578307
Q Bss19 Bone structure and strength QTL 19 JBrowse link 15 26,381,041 106,550,657 RGD:1578307
Q Bss20 Bone structure and strength QTL 20 JBrowse link 18 15,695,872 87,080,053 RGD:1578307
Q Bss21 Bone structure and strength QTL 21 JBrowse link 18 15,695,872 87,080,053 RGD:1578307
Q Bss22 Bone structure and strength QTL 22 JBrowse link 1 189,170,900 234,170,900 RGD:2293455
Q Bss23 Bone structure and strength QTL 23 JBrowse link 6 1 43,665,660 RGD:2293455
Q Bss24 Bone structure and strength QTL 24 JBrowse link 7 55,495,689 100,495,689 RGD:2293455
Q Bss25 Bone structure and strength QTL 25 JBrowse link 10 73,008,136 112,626,471 RGD:2293455
Q Bss26 Bone structure and strength QTL 26 JBrowse link 13 71,230,858 114,033,958 RGD:2293455
Q Bss27 Bone structure and strength QTL 27 JBrowse link 1 189,170,900 234,170,900 RGD:2293455
Q Bss28 Bone structure and strength QTL 28 JBrowse link 6 1 43,665,660 RGD:2293455
Q Bss29 Bone structure and strength QTL 29 JBrowse link 15 17,249,641 62,249,641 RGD:2293455
Q Bss3 Bone structure and strength QTL 3 JBrowse link 4 109,636,356 154,636,356 RGD:1549683
Q Bss9 Bone structure and strength QTL 9 JBrowse link 1 254,393 43,579,402 RGD:1578307
femur mineral mass term browser
Symbol Object Name JBrowse Chr Start Stop Reference
Q Bmd1 Bone mineral density QTL 1 JBrowse link 1 254,393 86,904,217 RGD:1553896
Q Bmd10 Bone mineral density QTL 10 JBrowse link 2 9,444,679 68,866,454 RGD:1578307
Q Bmd11 Bone mineral density QTL 11 JBrowse link 4 24,631,874 69,631,874 RGD:1578307
Q Bmd12 Bone mineral density QTL 12 JBrowse link 4 137,171,018 182,171,018 RGD:1578307
Q Bmd13 Bone mineral density QTL 13 JBrowse link 5 107,119,214 152,119,214 RGD:1578307
Q Bmd14 Bone mineral density QTL 14 JBrowse link 6 6,161,722 76,002,731 RGD:1578307
Q Bmd15 Bone mineral density QTL 15 JBrowse link 7 12,687,850 67,801,690 RGD:1578307
Q Bmd16 Bone mineral density QTL 16 JBrowse link 10 100,155,035 110,992,275 RGD:1578307
Q Bmd17 Bone mineral density QTL 17 JBrowse link 15 26,381,041 106,550,657 RGD:1578307
Q Bmd18 Bone mineral density QTL 18 JBrowse link 15 26,381,041 106,550,657 RGD:1578307
Q Bmd19 Bone mineral density QTL 19 JBrowse link 2 43,141,290 114,164,944 RGD:2293456
Q Bmd20 Bone mineral density QTL 20 JBrowse link 6 13,122,958 21,165,729 RGD:2293456
Q Bmd21 Bone mineral density QTL 21 JBrowse link 7 55,495,689 100,495,689 RGD:2293456
Q Bmd22 Bone mineral density QTL 22 JBrowse link 10 51,289,203 84,596,393 RGD:2293456
Q Bmd23 Bone mineral density QTL 23 JBrowse link 18 53,033,494 68,524,999 RGD:2293456
Q Bmd24 Bone mineral density QTL 24 JBrowse link 2 43,141,290 114,164,944 RGD:2293456
Q Bmd25 Bone mineral density QTL 25 JBrowse link 10 51,289,203 84,596,393 RGD:2293456
Q Bmd26 Bone mineral density QTL 26 JBrowse link 12 17,960,865 38,409,001 RGD:2293456
Q Bmd27 Bone mineral density QTL 27 JBrowse link 1 244,401,175 264,636,028 RGD:2293456
Q Bmd28 Bone mineral density QTL 28 JBrowse link 17 4,716,067 27,691,136 RGD:2293456
Q Bmd3 Bone mineral density QTL 3 JBrowse link 8 44,458,129 118,087,517 RGD:1553896
Q Bmd30 Bone mineral density QTL 30 JBrowse link 10 51,289,203 84,596,393 RGD:2293456
Q Bmd40 Bone mineral density QTL 40 JBrowse link 1 221,901,238 266,901,238 RGD:2300109
Q Bmd41 Bone mineral density QTL 41 JBrowse link 1 189,170,900 234,170,900 RGD:2300109
Q Bmd43 Bone mineral density QTL 43 JBrowse link 1 189,170,900 234,170,900 RGD:2300109
Q Bmd46 Bone mineral density QTL 46 JBrowse link 2 91,664,872 136,664,872 RGD:2300109
Q Bmd47 Bone mineral density QTL 47 JBrowse link 2 20,641,371 65,641,371 RGD:2300109
Q Bmd48 Bone mineral density QTL 48 JBrowse link 2 194,378,622 239,378,622 RGD:2300109
Q Bmd50 Bone mineral density QTL 50 JBrowse link 4 61,975,371 106,975,371 RGD:2300109
Q Bmd51 Bone mineral density QTL 51 JBrowse link 6 1 35,623,029 RGD:2300109
Q Bmd52 Bone mineral density QTL 52 JBrowse link 6 1 35,623,029 RGD:2300109
Q Bmd54 Bone mineral density QTL 54 JBrowse link 7 55,495,689 100,495,689 RGD:2300109
Q Bmd55 Bone mineral density QTL 55 JBrowse link 8 83,894,304 128,894,304 RGD:2300109
Q Bmd56 Bone mineral density QTL 56 JBrowse link 8 104,682,575 133,307,652 RGD:2300109
Q Bmd57 Bone mineral density QTL 57 JBrowse link 10 73,008,136 112,626,471 RGD:2300109
Q Bmd6 Bone mineral density QTL 6 JBrowse link 1 254,393 43,579,402 RGD:1578307
Q Bmd60 Bone mineral density QTL 60 JBrowse link 14 1 27,597,761 RGD:2300109
Q Bmd61 Bone mineral density QTL 61 JBrowse link 14 1 27,597,761 RGD:2300109
Q Bmd63 Bone mineral density QTL 63 JBrowse link 15 17,249,641 62,249,641 RGD:2300109
Q Bmd65 Bone mineral density QTL 65 JBrowse link 18 30,533,614 75,533,614 RGD:2300109
Q Bmd67 Bone mineral density QTL 67 JBrowse link 18 1 38,195,967 RGD:2300109
Q Bmd68 Bone mineral density QTL 68 JBrowse link 20 26,608,843 56,205,956 RGD:2300109
Q Bmd7 Bone mineral density QTL 7 JBrowse link 1 254,393 43,579,402 RGD:1578307
Q Bmd8 Bone mineral density QTL 8 JBrowse link 1 49,578,577 94,578,577 RGD:1578307
Q Bmd88 Bone mineral density QTL 88 JBrowse link 9 27,486,036 63,264,281 RGD:2293456
Q Bmd9 Bone mineral QTL density 9 JBrowse link 2 9,444,679 49,615,930 RGD:1578307
femur size trait term browser
Symbol Object Name JBrowse Chr Start Stop Reference
Q Bmd29 Bone mineral density QTL 29 JBrowse link 7 55,495,689 100,495,689 RGD:2293456
Q Bmd31 Bone mineral density QTL 31 JBrowse link 17 4,716,067 27,691,136 RGD:2293456
Q Bmd38 Bone mineral density QTL 38 JBrowse link 5 8,632,285 53,632,285 RGD:2293456
Q Bmd90 Bone mineral density QTL 90 JBrowse link 10 51,289,203 84,596,393 RGD:2293456
Q Bmd91 Bone mineral density QTL 91 JBrowse link 9 27,486,155 88,333,183 RGD:2293456
femur width term browser
Symbol Object Name JBrowse Chr Start Stop Reference
Q Bss15 Bone structure and strength QTL 15 JBrowse link 4 87,136,446 132,136,446 RGD:1578307
Q Bss18 Bone structure and strength QTL 18 JBrowse link 10 100,155,035 110,992,275 RGD:1578307

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2380
    organism subdivision trait 180
      surface structure trait 180
        surface structure morphology trait 180
          appendage morphology trait 142
            limb morphology trait 142
              hindlimb morphology trait 136
                hindlimb long bone morphology trait 135
                  femur morphology trait 79
                    femur curvature trait 0
                    femur size trait + 53
Path 2
Term Annotations click to browse term
  vertebrate trait 2380
    organ system trait 1549
      connective tissue trait 366
        connective tissue morphology trait 309
          bone morphology trait 163
            appendicular skeleton morphology trait 139
              skeleton extremities morphology trait 139
                long bone morphology trait 139
                  hindlimb long bone morphology trait 135
                    femur morphology trait 79
                      femur curvature trait 0
                      femur size trait + 53
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.