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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:urinary system morphology trait
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Accession:VT:0000516 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color, or pattern of any of the organs involved in the production or excretion of urine.
Synonyms:exact_synonym: excretory system morphology trait
 narrow_synonym: urinary organ morphology trait
 xref: MP:0000516


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kidney blood vessel morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA 0.05 RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA 0.05 RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA 0.05 RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
kidney glomerulus integrity trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom15 Glomerulus QTL 15 IDA 9.1 RGD PMID:16482158 RGD:2293335 NCBI chr13:67,635,937...109,350,286 JBrowse link
Q Glom16 Glomerulus QTL 16 IDA 7.4 RGD PMID:16482158 RGD:2293335 NCBI chr16:839,086...52,786,090 JBrowse link
Q Glom24 Glomerulus QTL 24 IDA 3.1 RGD PMID:16482158 RGD:2293335 NCBI chr 5:141,764,300...172,190,305 JBrowse link
Q Glom27 Glomerulus QTL 27 IDA 3.9 RGD PMID:22445570 RGD:7207870 NCBI chr13:21,120,177...109,350,286 JBrowse link
Q Rends1 Renal damage susceptibility QTL 1 IDA 0.05 RGD PMID:10454439 RGD:632218 NCBI chr 1:169,537,671...214,537,671 JBrowse link
Q Rf20 Renal function QTL 20 IDA 4.44 RGD PMID:14532335 RGD:727992 NCBI chr11:31,915,469...76,915,469 JBrowse link
Q Rf9 Renal function QTL 9 IDA 3.28 RGD PMID:14532335 RGD:727992 NCBI chr 2:113,746,222...205,135,428 JBrowse link
kidney glomerulus morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom1 Glomerulus QTL 1 IDA 4.0E-4 2.8 RGD PMID:12397040 RGD:634618 NCBI chr  X:75,294,106...120,294,106 JBrowse link
Q Glom10 Glomerulus QTL 10 IDA 3.4 RGD PMID:16720678 RGD:1581737 NCBI chr11:1...35,331,169 JBrowse link
Q Glom11 Glomerulus QTL 11 IDA 2.9 RGD PMID:16720678 RGD:1581737
Q Glom12 Glomerulus QTL 12 IDA 2.7 RGD PMID:16720678 RGD:1581737 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Glom13 Glomerulus QTL 13 IDA 2.2 RGD PMID:16720678 RGD:1581737
Q Glom14 Glomerulus QTL 14 IDA 2.5 RGD PMID:16720678 RGD:1581737 NCBI chr15:34,054,139...79,054,139 JBrowse link
Q Glom17 Glomerulus QTL 17 IDA 0.001 3.9 RGD PMID:18682577 RGD:2312422 NCBI chr 1:166,532,971...191,278,129 JBrowse link
Q Glom18 Glomerulus QTL 18 IDA 0.003 2.4 RGD PMID:18682577 RGD:2312422 NCBI chr 1:185,356,336...231,689,108 JBrowse link
Q Glom19 Glomerulus QTL 19 IDA 0.006 1.9 RGD PMID:18682577 RGD:2312422 NCBI chr 4:45,456,990...146,803,430 JBrowse link
Q Glom2 Glomerulus QTL 2 IDA 1.0E-4 3.3 RGD PMID:12397040 RGD:634618 NCBI chr 1:222,363,780...260,522,016 JBrowse link
Q Glom20 Glomerulus QTL 20 IDA 0.001 3.6 RGD PMID:18682577 RGD:2312422 NCBI chr11:44,285,759...82,566,702 JBrowse link
Q Glom21 Glomerulus QTL 21 IDA 0.005 2.0 RGD PMID:18682577 RGD:2312422 NCBI chr18:5,185,858...40,503,530 JBrowse link
Q Glom3 Glomerulus QTL 3 IDA 4.0E-4 2.9 RGD PMID:12397040 RGD:634618
Q Glom4 Glomerulus QTL 4 IDA 0.0082 2.4 RGD PMID:14638907 RGD:730279 NCBI chr 2:20,304,672...65,304,672 JBrowse link
Q Glom5 Glomerulus QTL 5 IDA 0.0035 2.5 RGD PMID:14638907 RGD:730279 NCBI chr 7:96,670,164...135,012,528 JBrowse link
Q Glom6 Glomerulus QTL 6 IDA 3.0E-4 2.8 RGD PMID:14638907 RGD:730279 NCBI chr 9:64,573,531...109,573,531 JBrowse link
Q Glom7 Glomerulus QTL 7 IDA 2.0E-7 5.6 RGD PMID:14638907 RGD:730279 NCBI chr 6:71,201,409...116,201,409 JBrowse link
Q Glom8 Glomerulus QTL 8 IDA 9.0E-9 7.0 RGD PMID:14638907 RGD:730279 NCBI chr 6:86,894,788...131,894,788 JBrowse link
Q Glom9 Glomerulus QTL 9 IDA 3.5 RGD PMID:16720678 RGD:1581737 NCBI chr 2:92,337,601...137,337,601 JBrowse link
Q Rf57 Renal function QTL 57 IDA 0.0 RGD PMID:19584172 RGD:2316856 NCBI chr 5:59,793,528...90,450,144 JBrowse link
Q Rf58 Renal function QTL 58 IDA 7.8 RGD PMID:19584172 RGD:2316856 NCBI chr 7:68,938,720...113,886,318 JBrowse link
kidney mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coreg1 Compensatory renal growth QTL 1 IDA 11.8 RGD PMID:10732705 RGD:69708 NCBI chr 6:35,691,618...57,730,540 JBrowse link
Q Coreg2 Compensatory renal growth QTL 2 IDA 3.5 RGD PMID:10864582 RGD:61071 NCBI chr 4:148,423,102...157,580,971 JBrowse link
Q Kidm1 Kidney mass QTL 1 IDA 3.2 RGD PMID:12707388 RGD:634617 NCBI chr 1:213,707,201...252,085,212 JBrowse link
Q Kidm10 Kidney mass QTL 10 IDA 4.62096 RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...125,221,299 JBrowse link
Q Kidm11 Kidney mass QTL 11 IDA 3.571 RGD PMID:11721057 RGD:70849 NCBI chr12:11,073,825...24,234,895 JBrowse link
Q Kidm12 Kidney mass QTL 12 IDA 3.9 RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm13 Kidney mass QTL 13 IDA 2.9 RGD PMID:15452030 RGD:1302893 NCBI chr 3:41,874,578...104,104,347 JBrowse link
Q Kidm14 Kidney mass QTL 14 IDA 6.2 RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...35,837,242 JBrowse link
Q Kidm15 Kidney mass QTL 15 IDA 5.0 RGD PMID:15452030 RGD:1302893 NCBI chr 1:156,677,124...201,278,233 JBrowse link
Q Kidm16 Kidney mass QTL 16 IDA 3.0 RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...222,436,696 JBrowse link
Q Kidm17 Kidney mass QTL 17 IDA 2.9 RGD PMID:15452030 RGD:1302893 NCBI chr 2:81,754,530...227,146,641 JBrowse link
Q Kidm18 Kidney mass QTL 18 IDA 5.7 RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...256,448,636 JBrowse link
Q Kidm19 Kidney mass QTL 19 IDA 4.0 RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Kidm2 Kidney mass QTL 2 IDA 2.6 RGD PMID:12707388 RGD:634617 NCBI chr18:59,172,115...83,828,827 JBrowse link
Q Kidm20 Kidney mass QTL 20 IDA 4.3 RGD PMID:15452030 RGD:1302893 NCBI chr 1:177,227,632...256,448,636 JBrowse link
Q Kidm21 Kidney mass QTL 21 IDA 3.3 RGD PMID:15452030 RGD:1302893 NCBI chr10:15,028,513...60,430,477 JBrowse link
Q Kidm22 Kidney mass QTL 22 IDA 3.32 RGD PMID:14640890 RGD:1303386 NCBI chr 1:210,702,053...240,947,965 JBrowse link
Q Kidm23 Kidney mass QTL 23 IDA 3.88 RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm24 Kidney mass QTL 24 IDA 4.03 RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm25 Kidney mass QTL 25 IDA 1.87 RGD PMID:14640890 RGD:1303386 NCBI chr 5:90,067,849...128,034,027 JBrowse link
Q Kidm26 Kidney mass QTL 26 IDA 3.69 RGD PMID:14640890 RGD:1303386 NCBI chr 8:27,205,715...99,103,503 JBrowse link
Q Kidm27 Kidney mass QTL 27 IDA 5.77 RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm28 Kidney mass QTL 28 IDA 5.42 RGD PMID:14640890 RGD:1303386 NCBI chr 2:25,413,423...157,142,209 JBrowse link
Q Kidm29 Kidney mass QTL 29 IDA 1.0E-4 3.3 RGD PMID:16534143 RGD:1578520 NCBI chr 1:179,567,751...260,522,016 JBrowse link
Q Kidm3 Kidney mass QTL 3 IDA 3.1 RGD PMID:12707388 RGD:634617 NCBI chr19:29,322,490...57,337,602 JBrowse link
Q Kidm30 Kidney mass QTL 30 IDA 8.0E-4 3.5 RGD PMID:15728334 RGD:1580752 NCBI chr 3:64,655,305...115,665,732 JBrowse link
Q Kidm31 Kidney mass QTL 31 IDA 3.0 RGD PMID:15728334 RGD:1580752 NCBI chr 8:54,237,644...85,365,202 JBrowse link
Q Kidm32 Kidney mass QTL 32 IDA 0.0018 3.9 RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Kidm33 Kidney mass QTL 33 IDA 6.9 RGD PMID:15728334 RGD:1580752 NCBI chr 1:188,377,360...224,054,420 JBrowse link
Q Kidm34 Kidney mass QTL 34 IDA 1.0E-4 4.0 RGD PMID:15728334 RGD:1580752 NCBI chr 4:148,090,542...168,069,246 JBrowse link
Q Kidm35 Kidney mass QTL 35 IDA RGD PMID:16700878 RGD:1626643 NCBI chr 1:199,368,955...224,569,684 JBrowse link
Q Kidm36 Kidney mass QTL 36 IDA 0.002 RGD PMID:17143582 RGD:1599557 NCBI chr 2:190,613,715...226,808,892 JBrowse link
Q Kidm37 Kidney mass QTL 37 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 3:70,653,097...121,056,321 JBrowse link
Q Kidm38 Kidney mass QTL 38 IDA 0.002 RGD PMID:17143582 RGD:1599557 NCBI chr10:84,007,272...95,933,025 JBrowse link
Q Kidm39 Kidney mass QTL 39 IDA 0.002 RGD PMID:17143582 RGD:1599557 NCBI chr16:2,851,709...15,884,239 JBrowse link
Q Kidm4 Kidney mass QTL 4 IDA 3.83 RGD PMID:14532335 RGD:727992 NCBI chr 3:121,056,165...157,309,487 JBrowse link
Q Kidm40 Kidney mass QTL 40 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr17:37,479,847...82,479,847 JBrowse link
Q Kidm41 Kidney mass QTL 41 IDA 1.0E-4 3.7 RGD PMID:19448344 RGD:2312387 NCBI chr12:1...19,611,090 JBrowse link
Q Kidm42 Kidney mass QTL 42 IDA 4.0E-4 3.03 RGD PMID:20159938 RGD:7365117 NCBI chr12:1...36,247,923 JBrowse link
Q Kidm43 Kidney mass QTL 43 IDA 18.0 RGD PMID:24192394 RGD:8552897 NCBI chr 4:36,303,261...103,194,984 JBrowse link
Q Kidm44 Kidney mass QTL 44 IDA 0.025 3.42 RGD PMID:25707311 RGD:10045846 NCBI chr 1:191,033,875...236,033,875 JBrowse link
Q Kidm45 Kidney mass QTL 45 IDA 0.025 3.95 RGD PMID:25707311 RGD:10045846 NCBI chr 7:7,573,985...52,573,985 JBrowse link
Q Kidm46 Kidney mass QTL 46 IDA 0.025 3.79 RGD PMID:25707311 RGD:10045846 NCBI chr12:6,107,579...46,669,029 JBrowse link
Q Kidm47 Kidney mass QTL 47 IDA 0.05 2.91 RGD PMID:25707311 RGD:10045846 NCBI chr 7:47,251,783...65,728,867 JBrowse link
Q Kidm48 Kidney mass QTL 48 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 4:145,568,712...182,687,754 JBrowse link
Q Kidm49 Kidney mass QTL 49 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
Q Kidm5 Kidney mass QTL 5 IDA 3.51 RGD PMID:14532335 RGD:727992 NCBI chr 7:43,747,012...135,012,528 JBrowse link
Q Kidm50 Kidney mass QTL 50 IDA RGD PMID:25707311 RGD:10045846 NCBI chr10:418,344...45,418,344 JBrowse link
Q Kidm51 Kidney mass QTL 51 IDA RGD PMID:25707311 RGD:10045846 NCBI chr15:306,329...45,306,329 JBrowse link
Q Kidm52 Kidney mass QTL 52 IDA RGD PMID:25707311 RGD:10045846 NCBI chr17:1...31,701,463 JBrowse link
Q Kidm53 Kidney mass QTL 53 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 3:8,227,194...47,233,430 JBrowse link
Q Kidm54 Kidney mass QTL 54 IDA RGD PMID:25707311 RGD:10045846 NCBI chr 6:14,368,788...59,368,788 JBrowse link
Q Kidm55 Kidney mass QTL 55 IDA 4.9 RGD PMID:25296178 RGD:10402111 NCBI chr 7:70,840,118...72,474,897 JBrowse link
Q Kidm56 Kidney mass QTL 56 IDA 0.003 RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...175,950,118 JBrowse link
Q Kidm57 Kidney mass QTL 57 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 3:31,426,403...70,668,733 JBrowse link
Q Kidm58 Kidney mass QTL 58 IDA 0.002 RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...67,750,281 JBrowse link
Q Kidm59 Kidney mass QTL 59 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr18:6,791,251...12,205,285 JBrowse link
Q Kidm6 Kidney mass QTL 6 IDA 3.93 RGD PMID:14532335 RGD:727992 NCBI chr13:69,060,519...86,800,898 JBrowse link
Q Kidm60 Kidney mass QTL 60 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 2:137,219,876...142,323,610 JBrowse link
Q Kidm61 Kidney mass QTL 61 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...185,122,374 JBrowse link
Q Kidm62 Kidney mass QTL 62 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 2:142,323,368...146,786,035 JBrowse link
Q Kidm63 Kidney mass QTL 63 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 3:18,311,454...47,233,430 JBrowse link
Q Kidm64 Kidney mass QTL 64 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 3:145,925,360...166,177,555 JBrowse link
Q Kidm65 Kidney mass QTL 65 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr 8:43,296,169...98,968,765 JBrowse link
Q Kidm66 Kidney mass QTL 66 IDA 0.009 RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...68,164,786 JBrowse link
Q Kidm67 Kidney mass QTL 67 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr10:90,404,397...107,211,142 JBrowse link
Q Kidm68 Kidney mass QTL 68 IDA 0.02 RGD PMID:17143582 RGD:1599557 NCBI chr10:71,115,217...72,606,468 JBrowse link
Q Kidm69 Kidney mass QTL 69 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr16:832,380...4,227,609 JBrowse link
Q Kidm7 Kidney mass QTL 7 IDA 3.55 RGD PMID:14532335 RGD:727992 NCBI chr15:82,262,520...98,288,169 JBrowse link
Q Kidm70 Kidney mass QTL 70 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr17:23,653,184...70,974,005 JBrowse link
Q Kidm71 Kidney mass QTL 71 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr18:52,539,763...76,104,388 JBrowse link
Q Kidm72 Kidney mass QTL 72 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr18:26,548,082...46,969,551 JBrowse link
Q Kidm73 Kidney mass QTL 73 IDA 0.001 RGD PMID:17143582 RGD:1599557 NCBI chr18:11,944,273...26,548,295 JBrowse link
Q Kidm8 Kidney mass QTL 8 IDA 28.15 RGD PMID:9097967 RGD:629573 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Kidm9 Kidney mass QTL 9 IDA 3.934 RGD PMID:11721057 RGD:70849 NCBI chr 7:80,221,299...112,308,525 JBrowse link
kidney morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Klgr1 Kidney lesion grade QTL 1 IDA 1.0E-4 3.3 RGD PMID:16534143 RGD:1578520 NCBI chr 8:30,848,154...101,699,754 JBrowse link
kidney pelvis morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Kiddil1 Kidney dilation QTL 1 IDA 3.7 RGD PMID:18523158 RGD:2293631 NCBI chr 6:81,132,889...104,393,926 JBrowse link
Q Kiddil2 Kidney dilation QTL 2 IDA 4.8 RGD PMID:18523158 RGD:2293631 NCBI chr 6:20,866,422...81,133,036 JBrowse link
Q Kiddil3 Kidney dilation QTL 3 IDA 4.3 RGD PMID:18523158 RGD:2293631 NCBI chr 6:81,132,889...104,393,926 JBrowse link
Q Kiddil4 Kidney dilation QTL 4 IDA 4.4 RGD PMID:18523158 RGD:2293631 NCBI chr 6:20,866,422...81,133,036 JBrowse link
Q Kiddil5 Kidney dilation QTL 5 IDA 3.8 RGD PMID:18523158 RGD:2293631 NCBI chr 2:42,804,607...157,142,209 JBrowse link
Q Kiddil6 Kidney dilation QTL 6 IDA 3.1 RGD PMID:18523158 RGD:2293631 NCBI chr 2:42,804,607...182,042,367 JBrowse link
Q Kiddil7 Kidney dilation QTL 7 IDA 3.5 RGD PMID:18523158 RGD:2293631 NCBI chr 2:219,753,301...247,136,170 JBrowse link
Q Kiddil8 Kidney dilation QTL 8 IDA 2.9 RGD PMID:18523158 RGD:2293631 NCBI chr 2:219,753,301...247,136,170 JBrowse link
Q Kiddil9 Kidney dilation QTL 9 IDA 2.9 RGD PMID:18523158 RGD:2293631 NCBI chr 4:120,926,564...148,090,731 JBrowse link
kidney renin amount term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf47 Renal function QTL 47 IDA 3.7 RGD PMID:15452030 RGD:1302893 NCBI chr13:30,395,351...101,056,920 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2911
    organ system trait 1991
      urinary system trait 346
        urinary system morphology trait 184
          kidney morphology trait + 184
          penis morphology trait + 0
          ureter morphology trait + 0
          urethra morphology trait + 0
          urinary bladder morphology trait + 0
          urinary system integrity trait + 15
          urothelium morphology trait 0
paths to the root