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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:intestine morphology trait
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Accession:VT:0000477 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the digestive tube passing from the stomach to the anus.
Synonyms:xref: ATOL:0000477


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cecum mucosa thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ginf1 Gastrointestinal inflammation QTL 1 IDA RGD PMID:19526527 RGD:2316974 NCBI chr 8:4,705,810...49,705,810 JBrowse link
intestine integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Colcr1 Colorectal carcinoma resistance QTL 1 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 4:1...29,494,328 JBrowse link
Q Colcr2 Colorectal carcinoma resistance QTL 2 IDA RGD PMID:17510081 RGD:1625309 NCBI chr15:2,266,368...22,711,984 JBrowse link
Q Colcr3 Colorectal carcinoma resistance QTL 3 IDA RGD PMID:17510081 RGD:1625309 NCBI chr18:2,249,477...22,066,430 JBrowse link
Q Colcr4 Colorectal carcinoma resistance QTL4 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 6:20,338,777...62,613,667 JBrowse link
Q Colcr5 Colorectal carcinoma resistance QTL 5 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 6:122,549,046...137,801,795 JBrowse link
Q Colcr6 Colorectal carcinoma resistance QTL 6 IDA RGD PMID:17510081 RGD:1625309 NCBI chr15:73,690,518...99,794,247 JBrowse link
Q Colcr7 Colorectal carcinoma resistance QTL 7 IDA RGD PMID:17510081 RGD:1625309 NCBI chr17:2,115,149...21,881,669 JBrowse link
Q Colcr8 Colorectal carcinoma resistance QTL 8 IDA RGD PMID:17510081 RGD:1625309 NCBI chr18:22,066,242...52,293,055 JBrowse link
Q Colcr9 Colorectal carcinoma resistance QTL 9 IDA RGD PMID:17510081 RGD:1625309 NCBI chr20:1,530,655...46,530,655 JBrowse link
Q Colcs1 Colorectal carcinoma susceptibility QTL 1 IDA RGD PMID:17510081 RGD:1625309 NCBI chr 5:121,846,814...166,846,814 JBrowse link
Q Xhs1 X-ray hypersensitivity QTL 1 IDA RGD PMID:11003700 RGD:69702 NCBI chr 4:82,798,864...152,731,274 JBrowse link
Q Xhs2 X-ray hypersensitivity QTL 2 IDA RGD PMID:11003700 RGD:69702 NCBI chr 1:15,321,100...19,121,980 JBrowse link
Q Xhs3 X-ray hypersensitivity QTL 3 IDA RGD PMID:11381618 RGD:631318 NCBI chr 4:84,728,680...129,854,654 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2888
    organ system trait 1978
      alimentary system trait 127
        gastrointestinal system morphology trait 44
          intestine morphology trait 21
            intestinal cell morphology trait + 0
            intestinal mucosa morphology trait + 0
            intestine integrity trait 18
            intestine length + 0
            intestine mass + 0
            large intestine morphology trait + 3
            small intestine morphology trait + 0
paths to the root