coat/hair morphology trait - Ontology Report

VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:	coat/hair morphology trait	go back to main search page
Accession:	VT:0000367	browse the term
Definition:	Any measurable or observable characteristic related to the shape, structure, color, or pattern of the fine, keratinized filamentous growths arising from the epidermis of mammals.

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Genes (4)

coat/hair pigmentation trait

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Asip

agouti signaling protein

Coat colour, saddle tan vs black-and-tan
Coat colour, agouti

NCBI chrNW_004936561:6,341,667...6,346,440
Ensembl chrNW_004936561:6,341,623...6,346,458

melanocortin 1 receptor

Coat colour, melanistic mask

NCBI chrNW_004936641:193,885...198,730

premelanosome protein

Coat colour, merle

NCBI chrNW_004936646:368,064...379,085
Ensembl chrNW_004936646:365,809...379,130

proteasome 20S subunit beta 7

Coat colour, harlequin

NCBI chrNW_004936487:12,634,561...12,689,914
Ensembl chrNW_004936487:12,631,612...12,689,936

Term paths to the root

Path 1
Term	Annotations
vertebrate trait	5
organ system trait	5
integumentary system trait	4
integumentary system morphology trait	4
skin adnexa morphology trait	4
coat/hair morphology trait	4
coat/hair pigmentation trait	4
hair amount	0
hair length	0
hair shaft morphology trait +	0
hair texture trait	0
Path 2
Term	Annotations
vertebrate trait	5
organism subdivision trait	4
surface structure trait	4
surface structure morphology trait	4
integumentary system morphology trait	4
skin adnexa morphology trait	4
coat/hair morphology trait	4
coat/hair pigmentation trait	4
hair amount	0
hair length	0
hair shaft morphology trait +	0
hair texture trait	0

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