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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:urine trait
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Accession:VT:0000056 term browser browse the term
Definition:Any measurable or observable characteristic related to the fluid and dissolved substances excreted by the kidneys.
Synonyms:xref: ATOL:0001491


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total urine protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur1 Proteinuria QTL 1 IDA RGD PMID:9799838 RGD:619599 NCBI chr13:39,372,927...42,310,885 JBrowse link
Q Pur12 Proteinuria QTL 12 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 2:115,721,880...154,182,196 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 3:81,136,227...154,416,635 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA RGD PMID:16390874 RGD:1578625 NCBI chr17:8,424,467...16,620,067 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA RGD PMID:16390874 RGD:1578625 NCBI chr20:8,654,341...18,872,273 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA RGD PMID:18064521 RGD:2292230 NCBI chr13:41,060,057...47,227,923 JBrowse link
Q Pur18 Proteinuria QTL 18 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 5:1,525,098...33,001,026 JBrowse link
Q Pur19 Proteinuria QTL 19 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 4:65,989,243...97,759,057 JBrowse link
Q Pur20 Proteinuria QTL 20 IDA RGD PMID:18682577 RGD:2312422 NCBI chr 6:130,561,943...144,745,573 JBrowse link
Q Pur24 Proteinuria QTL 24 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 2:198,704,357...217,498,710 JBrowse link
Q Pur25 Proteinuria QTL 25 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 6:59,803,065...94,001,333 JBrowse link
Q Pur26 Proteinuria QTL 26 IDA RGD PMID:20876844 RGD:4889613 NCBI chr 9:90,024,661...107,199,079 JBrowse link
Q Pur27 Proteinuria QTL 27 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:4,039,113...18,872,273 JBrowse link
Q Pur28 Proteinuria QTL 28 IDA RGD PMID:20876844 RGD:4889613 NCBI chr11:47,901,049...78,471,527 JBrowse link
Q Pur29 Proteinuria QTL 29 IDA RGD PMID:20876844 RGD:4889613 NCBI chr13:42,310,744...86,833,540 JBrowse link
Q Pur30 Proteinuria QTL 30 IDA RGD PMID:20876844 RGD:4889613 NCBI chr20:8,654,341...30,991,290 JBrowse link
Q Pur31 Proteinuria QTL 31 IDA RGD PMID:21814219 RGD:6903249 NCBI chr 9:46,579,769...91,579,769 JBrowse link
Q Pur32 Proteinuria QTL 32 IDA RGD PMID:24192394 RGD:8552897 NCBI chr13:79,567,081...103,613,733 JBrowse link
Q Pur33 Proteinuria QTL 33 IDA RGD PMID:27113531 RGD:11353859 NCBI chr 9:95,430,880...96,200,480 JBrowse link
Q Pur4 Proteinuria QTL 4 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:161,321,256...273,791,893 JBrowse link
Q Pur5 Proteinuria QTL 5 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:33,558,660...109,028,082 JBrowse link
Q Pur6 Proteinuria QTL 6 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:67,451,664...99,920,892 JBrowse link
Q Pur7 Proteinuria QTL 7 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 2:68,865,414...80,632,096 JBrowse link
Q Pur8 Proteinuria QTL 8 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:75,623,393...136,142,742 JBrowse link
Q Rf4 Renal disease susceptibility QTL 4 IDA RGD PMID:11053483 RGD:70856 NCBI chr14:1...34,403,399 JBrowse link
Q Rf44 Renal function QTL 44 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:19,251,717...32,670,473 JBrowse link
Q Rf5 Renal disease susceptibility QTL 5 IDA RGD PMID:11053483 RGD:70856
Q Rf52 Renal function QTL 52 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 1:252,948,438...281,795,785 JBrowse link
Q Rf53 Renal function QTL 53 IDA RGD PMID:16541022 RGD:1578626 NCBI chr 3:58,204,463...170,534,769 JBrowse link
urine albumin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur10 Proteinuria QTL 10 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:47,264,023...86,994,547 JBrowse link
Q Pur11 Proteinuria QTL 11 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:9,016,906...82,995,569 JBrowse link
Q Rf3 Renal disease susceptibility QTL 3 IDA RGD PMID:11053483 RGD:70856 NCBI chr 3:114,376,250...159,376,250 JBrowse link
Q Rf59 Renal function QTL 59 IDA RGD PMID:21127141 RGD:5684423 NCBI chr 3:147,072,047...154,807,958 JBrowse link
Q Uae1 Urinary albumin excretion QTL 1 IDA RGD PMID:12397040 RGD:634618 NCBI chr 1:94,201,400...184,846,632 JBrowse link
Q Uae10 Urinary albumin excretion QTL 10 IDA RGD PMID:12707388 RGD:634617 NCBI chr11:28,314,665...86,994,795 JBrowse link
Q Uae11 Urinary albumin excretion QTL 11 IDA RGD PMID:12707388 RGD:634617 NCBI chr13:64,501,351...82,995,671 JBrowse link
Q Uae12 Urinary albumin excretion QTL 12 IDA RGD PMID:12707388 RGD:634617 NCBI chr19:2,432,963...62,275,575 JBrowse link
Q Uae13 Urinary albumin excretion QTL 13 IDA RGD PMID:12799471 RGD:634633 NCBI chr 2:149,114,878...225,501,939 JBrowse link
Q Uae14 Urinary albumin excretion QTL 14 IDA RGD PMID:12799471 RGD:634633 NCBI chr 6:88,996,335...139,410,483 JBrowse link
Q Uae15 Urinary albumin excretion QTL 15 IDA RGD PMID:12799471 RGD:634633 NCBI chr 8:32,201,981...75,971,421 JBrowse link
Q Uae16 Urinary albumin excretion QTL 16 IDA RGD PMID:12799471 RGD:634633 NCBI chr 9:63,270,073...107,878,387 JBrowse link
Q Uae17 Urinary albumin excretion QTL 17 IDA RGD PMID:12799471 RGD:634633 NCBI chr10:80,946,110...88,200,662 JBrowse link
Q Uae18 Urinary albumin excretion QTL 18 IDA RGD PMID:12799471 RGD:634633 NCBI chr11:16,321,973...46,583,360 JBrowse link
Q Uae19 Urinary albumin excretion QTL 19 IDA RGD PMID:12799471 RGD:634633 NCBI chr19:8,072,545...47,318,201 JBrowse link
Q Uae2 Urinary albumin excretion QTL 2 IDA RGD PMID:12397040 RGD:634618 NCBI chr 6:76,902,247...114,203,334 JBrowse link
Q Uae20 Urinary albumin excretion QTL 20 IDA RGD PMID:14638907 RGD:730279 NCBI chr 1:241,482,188...281,795,785 JBrowse link
Q Uae21 Urinary albumin excretion QTL 21 IDA RGD PMID:14638907 RGD:730279 NCBI chr 4:106,347,236...151,347,236 JBrowse link
Q Uae22 Urinary albumin excretion QTL 22 IDA RGD PMID:14638907 RGD:730279 NCBI chr 6:68,781,170...147,991,367 JBrowse link
Q Uae23 Urinary albumin excretion QTL 23 IDA RGD PMID:14638907 RGD:730279 NCBI chr 7:114,825,174...145,729,302 JBrowse link
Q Uae24 Urinary albumin excretion QTL 24 IDA RGD PMID:14638907 RGD:730279 NCBI chr 8:21,813,070...100,873,963 JBrowse link
Q Uae25 Urinary albumin excretion QTL 25 IDA RGD PMID:14638907 RGD:730279 NCBI chr 9:29,466,970...107,878,528 JBrowse link
Q Uae26 Urinary albumin excretion QTL 26 IDA RGD PMID:14638907 RGD:730279 NCBI chr15:75,527,634...111,246,239 JBrowse link
Q Uae27 Urinary albumin excretion QTL 27 IDA RGD PMID:14638907 RGD:730279 NCBI chr  X:1...44,092,703 JBrowse link
Q Uae28 Urinary albumin excretion QTL 28 IDA RGD PMID:15161966 RGD:1300043 NCBI chr 6:1...41,917,988 JBrowse link
Q Uae29 Urinary albumin excretion QTL 29 IDA RGD PMID:15161966 RGD:1300043 NCBI chr19:6,506,761...60,220,581 JBrowse link
Q Uae3 Urinary albumin excretion QTL 3 IDA RGD PMID:12397040 RGD:634618 NCBI chr12:5,406,094...12,355,490 JBrowse link
Q Uae30 Urinary albumin excretion QTL 30 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 1:161,321,256...273,791,893 JBrowse link
Q Uae31 Urinary albumin excretion QTL 31 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 8:33,558,660...109,028,082 JBrowse link
Q Uae33 Urinary albumin excretion QTL 33 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 6:75,623,393...136,142,742 JBrowse link
Q Uae34 Urinary albumin excretion QTL 34 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 9:67,451,664...99,920,892 JBrowse link
Q Uae35 Urinary albumin excretion QTL 35 IDA RGD PMID:16534143 RGD:1578520 NCBI chr11:47,264,023...86,994,547 JBrowse link
Q Uae36 Urinary albumin excretion QTL 36 IDA RGD PMID:16534143 RGD:1578520 NCBI chr13:9,016,906...82,995,569 JBrowse link
Q Uae37 Urinary albumin excretion QTL 37 IDA RGD PMID:17953514 RGD:1642911 NCBI chr 6:68,781,170...147,991,367 JBrowse link
Q Uae39 Urinary albumin excretion QTL 39 IDA RGD PMID:16534143 RGD:1578520 NCBI chr19:2,432,963...47,217,667 JBrowse link
Q Uae4 Urinary albumin excretion QTL 4 IDA RGD PMID:12397040 RGD:634618 NCBI chr17:37,790,306...73,413,148 JBrowse link
Q Uae40 Urinary albumin excretion QTL 40 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 4:16,149,941...61,149,941 JBrowse link
Q Uae41 Urinary albumin excretion QTL 41 IDA RGD PMID:20159938 RGD:7365117 NCBI chr10:1...29,592,136 JBrowse link
Q Uae42 Urinary albumin excretion QTL 42 IDA RGD PMID:20159938 RGD:7365117 NCBI chr18:21,639,491...66,639,491 JBrowse link
Q Uae43 Urinary albumin excretion QTL 43 IDA RGD PMID:20159938 RGD:7365117 NCBI chr13:72,583,716...114,033,958 JBrowse link
Q Uae44 Urinary albumin excretion QTL 44 IDA RGD PMID:20159938 RGD:7365117 NCBI chr20:1...27,357,423 JBrowse link
Q Uae45 Urinary albumin excretion QTL 45 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 1:244,148,899...282,763,074 JBrowse link
Q Uae46 Urinary albumin excretion QTL 46 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 1:221,901,238...266,901,238 JBrowse link
Q Uae5 Urinary albumin excretion QTL 5 IDA RGD PMID:12707388 RGD:634617 NCBI chr 1:161,321,152...273,792,054 JBrowse link
Q Uae6 Urinary albumin excretion QTL 6 IDA RGD PMID:12707388 RGD:634617 NCBI chr 2:68,866,454...80,631,953 JBrowse link
Q Uae7 Urinary albumin excretion QTL 7 IDA RGD PMID:12707388 RGD:634617 NCBI chr 6:75,623,277...136,143,011 JBrowse link
Q Uae8 Urinary albumin excretion QTL 8 IDA RGD PMID:12707388 RGD:634617 NCBI chr 8:30,845,450...33,558,764 JBrowse link
Q Uae9 Urinary albumin excretion QTL 9 IDA RGD PMID:12707388 RGD:634617 NCBI chr 9:29,075,079...122,095,297 JBrowse link
urine calcium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hc1 Hypercalciuria QTL 1 IDA RGD PMID:12819244 RGD:631855 NCBI chr 1:193,968,438...261,264,776 JBrowse link
Q Hc2 Hypercalciuria QTL 2 IDA RGD PMID:12819244 RGD:631855 NCBI chr 4:1...42,118,977 JBrowse link
Q Hc3 Hypercalciuria QTL 3 IDA RGD PMID:12819244 RGD:631855 NCBI chr 7:50,252,103...95,252,103 JBrowse link
Q Hc4 Hypercalciuria QTL 4 IDA RGD PMID:12819244 RGD:631855 NCBI chr10:1...38,594,330 JBrowse link
Q Hc5 Hypercalciuria QTL 5 IDA RGD PMID:12819244 RGD:631855 NCBI chr14:63,548,095...108,548,095 JBrowse link
Q Hc6 Hypercalciuria QTL 6 IDA RGD PMID:16611718 RGD:1582396 NCBI chr 1:195,598,053...265,002,735 JBrowse link
urine catecholamine amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cstrr2 Cold stress response QTL 2 IDA RGD PMID:21063213 RGD:4889147 NCBI chr 1:166,577,232...169,318,847 JBrowse link
urine creatinine amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf7 Renal function QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:201,146,802...241,482,368 JBrowse link
urine glucose amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iddm15 Insulin dependent diabetes mellitus QTL 15 IDA RGD PMID:11327715 RGD:619685 NCBI chr18:62,805,406...80,696,375 JBrowse link
Q Iddm18 Insulin dependent diabetes mellitus QTL 18 IDA RGD PMID:11327715 RGD:619685 NCBI chr 6:121,224,054...135,658,578 JBrowse link
urine mineral amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Uminl1 Urine mineral level QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:29,682,732...74,682,732 JBrowse link
Q Uminl2 Urine mineral level QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:41,679,046...86,679,046 JBrowse link
Q Uminl3 Urine mineral level QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:78,805,083...123,805,083 JBrowse link
Q Uminl4 Urine mineral level QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:60,980,905...105,980,905 JBrowse link
Q Uminl5 Urine mineral level QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr19:1...38,221,845 JBrowse link
urine potassium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf26 Renal function QTL 26 IDA RGD PMID:14532335 RGD:727992 NCBI chr18:54,108,474...67,502,122 JBrowse link
Q Rf28 Renal function QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:46,113,461...79,689,689 JBrowse link
Q Rf29 Renal function QTL 29 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:36,033,165...79,689,689 JBrowse link
Q Rf30 Renal function QTL 30 IDA RGD PMID:11721057 RGD:70849 NCBI chr 3:40,523,593...92,654,473 JBrowse link
Q Rf31 Renal function QTL 31 IDA RGD PMID:11721057 RGD:70849 NCBI chr 4:37,703,272...75,345,433 JBrowse link
urine protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Glom22 Glomerulus QTL 22 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 1:11,314,658...34,993,348 JBrowse link
Q Glom23 Glomerulus QTL 23 IDA RGD PMID:16482158 RGD:2293335 NCBI chr 2:208,594,330...263,179,188 JBrowse link
Q Glom25 Glomerulus QTL 25 IDA RGD PMID:16482158 RGD:2293335 NCBI chr10:86,566,908...112,626,471 JBrowse link
Q Glom26 Glomerulus QTL 26 IDA RGD PMID:16482158 RGD:2293335 NCBI chr15:15,492,360...72,568,189 JBrowse link
Q Pur17 Proteinuria QTL 17 IDA RGD PMID:19448344 RGD:2312387 NCBI chr 1:167,394,665...238,830,534 JBrowse link
Q Pur2 Proteinuria QTL 2 IDA RGD PMID:12707388 RGD:634617 NCBI chr10:22,901,497...93,886,300 JBrowse link
Q Pur21 Proteinuria QTL 21 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 5:61,086,653...117,554,114 JBrowse link
Q Pur22 Proteinuria QTL 22 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 7:55,072,862...123,602,998 JBrowse link
Q Pur3 Proteinuria QTL 3 IDA RGD PMID:14638907 RGD:730279 NCBI chr15:1...42,844,179 JBrowse link
Q Rf1 Renal disease susceptibility QTL 1 IDA RGD PMID:8528250 RGD:61060
Q Rf2 Renal disease susceptibility QTL 2 IDA RGD PMID:8528250 RGD:61060 NCBI chr 1:111,446,783...156,446,783 JBrowse link
Q Uae32 Urinary albumin excretion QTL 32 IDA RGD PMID:16534143 RGD:1578520 NCBI chr 2:68,865,414...80,632,096 JBrowse link
urine sodium amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf27 Renal function QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:31,489,454...79,689,689 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2379
    organ system trait 1548
      urinary system trait 247
        urinary system morphology trait 228
          urine trait 111
            urine color 0
            urine molecular composition trait + 111
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.