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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:vertebrate trait
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Accession:VT:0000001 term browser browse the term
Definition:Any measurable or observable characteristic of a vertebrate organism.


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blood pressure trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:24722447 RGD:12910103 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link
blood urea nitrogen amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:24722447 RGD:12910103 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link
cholesterol amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:24722447 RGD:12910103 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link
coat/hair pigmentation trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein ISO Coat colour, saddle tan vs black-and-tan
Coat colour, agouti
OMIA PMID:8202545 PMID:12692166 PMID:15520882 PMID:15965787 PMID:17630272 More... NCBI chrNW_004936561:6,341,667...6,346,440
Ensembl chrNW_004936561:6,341,623...6,346,458
JBrowse link
G Mc1r melanocortin 1 receptor ISO Coat colour, melanistic mask OMIA PMID:12692165 PMID:21353269 PMID:29932470 PMID:33672409 PMID:34751460 NCBI chrNW_004936641:193,885...198,730 JBrowse link
G Pmel premelanosome protein ISO Coat colour, merle OMIA PMID:330141 PMID:340189 PMID:418699 PMID:3099512 PMID:3998446 More... NCBI chrNW_004936646:368,064...379,085
Ensembl chrNW_004936646:365,809...379,130
JBrowse link
G Psmb7 proteasome 20S subunit beta 7 ISO Coat colour, harlequin OMIA PMID:3270445 PMID:3998446 PMID:18513894 PMID:21256207 PMID:31658272 More... NCBI chrNW_004936487:12,634,561...12,689,914
Ensembl chrNW_004936487:12,631,612...12,689,936
JBrowse link
macrophage migration trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:24722447 RGD:12910103 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link
triglyceride amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4 group A member 1 ISO RGD PMID:24722447 RGD:12910103 NCBI chrNW_004936512:9,486,096...9,508,338
Ensembl chrNW_004936512:9,499,754...9,508,423
JBrowse link

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