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CROSS-SPECIES ANATOMY - ANNOTATIONS

The Basic subset of the UBERON integrated, cross-species anatomy ontology is downloaded weekly from http://berkeleybop.org/ontologies/uberon/basic.obo. For more information about this ontology see the "About" page on the UBERON website at http://uberon.github.io/about.html.
Term:collection of basal ganglia
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Accession:UBERON:0010011 term browser browse the term
Definition:Subcortical masses of gray matter in the forebrain and midbrain that are richly interconnected and so viewed as a functional system. The nuclei usually included are the caudate nucleus (caudoputamen in rodents), putamen, globus pallidus, substantia nigra (pars compacta and pars reticulata) and the subthalamic nucleus. Some also include the nucleus accumbens and ventral pallidum.
Comment:[homology-note] "All nuclei of the mammalian basal ganglia are also present in the oldest vertebrates.[well established][VHOG]" xsd:string {date_retrieved="2012-09-17", external_class="VHOG:0001696", ontology="VHOG", source="DOI:10.1016/j.cub.2011.05.001 Stephenson-Jones M, Samuelsson E, Ericsson J, Robertson B, Grillner S, Evolutionary conservation of the basal ganglia as a common vertebrate mechanism for action selection. Current Biology (2011)", source="http://bgee.unil.ch/"}
Synonyms:exact_synonym: basal ganglia;   basal ganglia set;   basal nuclei (basal ganglia);   set of basal ganglia
 related_synonym: basal nuclei;   cerebral nuclei;   set of basal nuclei;   subcortical nuclei
 xref: BAMS:BG;   BM:Tel-BG;   EMAPA:32673;   FMA:84013;   GAID:617;   HBA:4276;   MA:0000184;   MBA:623;   MESH:D001479;   NCI:C12447;   PBA:4001;   UMLS:C0004781;   VHOG:0001696;   Wikipedia:Basal_ganglia;   birnlex:826;   neuronames:2677
 external_ontology: present_in_taxon NCBITaxon:9606


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Term paths to the root
Path 1
Term Annotations click to browse term
  UBERON ontology 0
    anatomical entity 0
      material anatomical entity 0
        disconnected anatomical group 0
          aggregate regional part of brain 0
            collection of basal ganglia 0
              basal ganglia of rodent 0
              basal ganglion + 0
Path 2
Term Annotations click to browse term
  UBERON ontology 0
    anatomical entity 0
      material anatomical entity 0
        anatomical structure 0
          multicellular anatomical structure 0
            multicellular organism 0
              embryo 0
                embryonic structure 0
                  epiblast (generic) 0
                    germ layer / neural crest 0
                      germ layer 0
                        ectoderm 0
                          ectoderm-derived structure 0
                            neurectoderm 0
                              future brain 0
                                brain 0
                                  cerebral subcortex 0
                                    collection of basal ganglia 0
                                      basal ganglia of rodent 0
                                      basal ganglion + 0
paths to the root