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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.
Term:TFRS_collection
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Accession:SO:0002297 term browser browse the term
Definition:The possible discontinous stretch of DNA that encompass all the TFRSs that regulate a promoter.
Comment:Added as per Mejia-Almonte et.al PMID:32665585. Moved from transcription_regulatory_region (SO:0001679) to transcriptional_cis_regulatory_region (SO:0001055) by Dave Sant on Feb 11, 2021 when transcription_regulatory_region was merged into transcriptional_cis_regulatory_region to be consistent with GO and reduce redundancy as part of the GREEKC consortium. See GitHub Issue #527.
Synonyms:exact_synonym: TFRS collection;   transcription factor regulatory site collection


show annotations for term's descendants           Sort by:
Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        biological_region 0
          gene_member_region 0
            regulatory_region 0
              transcriptional_cis_regulatory_region 0
                TFRS_collection 0
Path 2
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        biological_region 0
          gene_group 0
            gene 0
              gene_member_region 0
                regulatory_region 0
                  transcriptional_cis_regulatory_region 0
                    cis_regulatory_module 0
                      TF_binding_site 0
                        transcription_factor_regulatory_site 0
                          TFRS_collection 0
paths to the root