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The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at For more information about this ontology, see the Sequence Ontology Home Page at

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Accession:SO:0002074 term browser browse the term
Definition:A variant that falls in an intergenic region that is 1 kb or less between 2 genes.
Comment:This term is added to map to the Annovar annotation 'upstream,downstream' .
Synonyms:exact_synonym: ANNOVAR:upstream;downstream

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Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          intergenic_variant 0
            intergenic_1kb_variant 0
paths to the root