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The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at For more information about this ontology, see the Sequence Ontology Home Page at

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Accession:SO:0001632 term browser browse the term
Definition:A sequence variant located 3' of a gene.
Comment:Different groups annotate up and downstream to different lengths. The subtypes are specific and are backed up with cross references.
Synonyms:exact_synonym: Jannovar:downstream_gene_variant;   VEP:downstream_gene_variant;   downstream gene variant;   snpEff:DOWNSTREAM
 related_synonym: ANNOVAR:downstream

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Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          intergenic_variant 0
            downstream_gene_variant 0
              2KB_downstream_variant 0
              500B_downstream_variant 0
              5KB_downstream_variant 0
paths to the root