intron_variant - Ontology Report - Rat Genome Database

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SEQUENCE ONTOLOGY - ANNOTATIONS	{{ watchLinkText }}
The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.

Term:	intron_variant	go back to main search page
Accession:	SO:0001627	browse the term
Definition:	A transcript variant occurring within an intron.
Comment:	EBI term: Intronic variations - In intron.
Synonyms:	exact_synonym:	Jannovar:intron_variant; Seattleseq:intron; VAAST:intron_variant; VEP:intron_variant; intron variant; intron_; intronic; snpEff:INTRON
	related_synonym:	ANNOVAR:intronic; Seattleseq:intron-near-splice
	xref:	http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq"; http://snpeff.sourceforge.net/SnpEff_manual.html; http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences

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Term paths to the root

Path 1
Term	Annotations
SO ontology	0
sequence_variant	0
structural_variant	0
feature_variant	0
gene_variant	0
transcript_variant	0
intron_variant	0
coding_transcript_intron_variant +	0
conserved_intron_variant	0
non_coding_transcript_intron_variant	0
splice_site_variant +	0

paths to the root