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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.
Term:3_prime_UTR_variant
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Accession:SO:0001624 term browser browse the term
Definition:A UTR variant of the 3' UTR.
Comment:EBI term 3prime UTR variations - In 3prime UTR.
Synonyms:exact_synonym: 3'UTR variant;   3PRIME_UTR;   Jannovar:3_prime_utr_variant;   Seattleseq:3-prime-UTR;   VAAST:3_prime_UTR_variant;   VAAST:three_prime_UTR_variant;   VEP:3_prime_UTR_variant;   snpEff:UTR_3_PRIME;   three prime UTR variant;   untranslated-3
 related_synonym: ANNOVAR:UTR3
 xref: http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp "Seattleseq";   http://snpeff.sourceforge.net/SnpEff_manual.html;   http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences


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  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          gene_variant 0
            transcript_variant 0
              coding_transcript_variant 0
                UTR_variant 0
                  3_prime_UTR_variant 0
                    3_prime_UTR_elongation 0
                    3_prime_UTR_exon_variant 0
                    3_prime_UTR_intron_variant 0
                    3_prime_UTR_truncation 0
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