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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.
Term:transcript_variant
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Accession:SO:0001576 term browser browse the term
Definition:A sequence variant that changes the structure of the transcript.
Synonyms:exact_synonym: Jannovar:transcript_variant;   VAAST:transcript_variant;   snpEff:TRANSCRIPT;   transcript variant
 xref: http://snpeff.sourceforge.net/SnpEff_manual.html


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Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          gene_variant 0
            transcript_variant 0
              NMD_transcript_variant 0
              coding_transcript_variant + 0
              complex_transcript_variant 0
              exon_variant + 0
              incomplete_transcript_variant + 0
              intragenic_variant 0
              intron_variant + 0
              non_coding_transcript_variant + 0
              partially_duplicated_transcript + 0
              splicing_variant + 0
              transcript_secondary_structure_variant + 0
paths to the root