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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.

Term:gene_variant
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Accession:SO:0001564 term browser browse the term
Definition:A sequence variant where the structure of the gene is changed.
Synonyms:exact_synonym: Jannovar:gene_variant;   VAAST:gene_variant;   gene structure variant;   snpEff:GENE
 xref: http://snpeff.sourceforge.net/SnpEff_manual.html



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Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_variant 0
      structural_variant 0
        feature_variant 0
          gene_variant 0
            gene_fusion + 0
            genic_downstream_transcript_variant 0
            genic_upstream_transcript_variant 0
            transcript_variant + 0
            translational_product_structure_variant + 0
paths to the root