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The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at For more information about this ontology, see the Sequence Ontology Home Page at

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Accession:SO:0001249 term browser browse the term
Definition:A fragment assembly is a genome assembly that orders overlapping fragments of the genome based on landmark sequences. The base pair distance between the landmarks is known allowing additivity of lengths.
Synonyms:exact_synonym: fragment assembly;   physical map

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  SO ontology 0
    sequence_feature 0
      region 0
        experimental_feature 0
          assembly 0
            fragment_assembly 0
              RH_map 0
              STS_map 0
              fingerprint_map 0
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