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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.
Term:gene
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Accession:SO:0000704 term browser browse the term
Definition:A region (or regions) that includes all of the sequence elements necessary to encode a functional transcript. A gene may include regulatory regions, transcribed regions and/or other functional sequence regions.
Comment:This term is mapped to MGED. Do not obsolete without consulting MGED ontology. A gene may be considered as a unit of inheritance.
Synonyms:exact_synonym: INSDC_feature:gene
 xref: http://en.wikipedia.org/wiki/Gene "wiki"

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Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        biological_region 0
          gene 0
            allele + 0
            candidate_gene + 0
            cryptic_gene + 0
            engineered_gene + 0
            epigenetically_modified_gene + 0
            foreign_gene + 0
            fusion_gene + 0
            gene_cassette + 0
            gene_component_region + 0
            gene_member_region + 0
            gene_with_non_canonical_start_codon + 0
            gene_with_polycistronic_transcript + 0
            gene_with_trans_spliced_transcript 0
            mt_gene + 0
            ncRNA_gene + 0
            negatively_autoregulated_gene 0
            nuclear_gene 0
            nucleomorph_gene 0
            plasmid_gene 0
            plastid_gene + 0
            positively_autoregulated_gene 0
            post_translationally_regulated_gene 0
            predicted_gene 0
            protein_coding_gene + 0
            proviral_gene + 0
            pseudogene + 0
            recombinationally_rearranged_gene + 0
            rescue_gene + 0
            retrogene 0
            silenced_gene + 0
            transgene + 0
            translationally_regulated_gene 0
            transposable_element_gene + 0
            vertebrate_immune_system_gene + 0
Path 2
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        biological_region 0
          gene_group 0
            gene 0
              allele + 0
              candidate_gene + 0
              cryptic_gene + 0
              engineered_gene + 0
              epigenetically_modified_gene + 0
              foreign_gene + 0
              fusion_gene + 0
              gene_cassette + 0
              gene_component_region + 0
              gene_member_region + 0
              gene_with_non_canonical_start_codon + 0
              gene_with_polycistronic_transcript + 0
              gene_with_trans_spliced_transcript 0
              mt_gene + 0
              ncRNA_gene + 0
              negatively_autoregulated_gene 0
              nuclear_gene 0
              nucleomorph_gene 0
              plasmid_gene 0
              plastid_gene + 0
              positively_autoregulated_gene 0
              post_translationally_regulated_gene 0
              predicted_gene 0
              protein_coding_gene + 0
              proviral_gene + 0
              pseudogene + 0
              recombinationally_rearranged_gene + 0
              rescue_gene + 0
              retrogene 0
              silenced_gene + 0
              transgene + 0
              translationally_regulated_gene 0
              transposable_element_gene + 0
              vertebrate_immune_system_gene + 0
paths to the root