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SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.

Term:RNApol_II_promoter
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Accession:SO:0000170 term browser browse the term
Definition:A DNA sequence in eukaryotic DNA to which RNA polymerase II binds, to begin transcription.
Comment:parent term RNA_polymerase_promoter SO:0001203 was obsoleted in Aug 2020, so term has been moved to eukaryotic_promoter SO:0002221.
Synonyms:exact_synonym: RNA polymerase B promoter;   RNApol II promoter;   polymerase II promoter
 related_synonym: pol II promoter



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Term paths to the root
Path 1
Term Annotations click to browse term
  gene_component_region 0
    promoter 0
      eukaryotic_promoter 0
        RNApol_II_promoter 0
          CAAT_signal 0
          DMv1_motif 0
          DMv2_motif 0
          DMv3_motif 0
          DMv5_motif 0
          DPE1_motif 0
          DRE_motif 0
          E_box_motif 0
          GC_rich_promoter_region 0
          INR1_motif 0
          NDM2_motif 0
          NDM3_motif 0
          RNApol_II_core_promoter + 0
          octamer_motif 0
Path 2
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        biological_region 0
          gene_group 0
            gene 0
              gene_member_region 0
                regulatory_region 0
                  transcriptional_cis_regulatory_region 0
                    promoter 0
                      eukaryotic_promoter 0
                        RNApol_II_promoter 0
                          CAAT_signal 0
                          DMv1_motif 0
                          DMv2_motif 0
                          DMv3_motif 0
                          DMv5_motif 0
                          DPE1_motif 0
                          DRE_motif 0
                          E_box_motif 0
                          GC_rich_promoter_region 0
                          INR1_motif 0
                          NDM2_motif 0
                          NDM3_motif 0
                          RNApol_II_core_promoter + 0
                          octamer_motif 0
paths to the root