Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

SEQUENCE ONTOLOGY - ANNOTATIONS

The Sequence Types and Features Ontology (SO) is downloaded weekly from the SourceForge CVS repository at http://song.cvs.sourceforge.net/viewvc/song/ontology/. For more information about this ontology, see the Sequence Ontology Home Page at http://www.sequenceontology.org/.

Term:contig
go back to main search page
Accession:SO:0000149 term browser browse the term
Definition:A contiguous sequence derived from sequence assembly. Has no gaps, but may contain N's from unavailable bases.
Synonyms:xref: http://en.wikipedia.org/wiki/Contig "wiki"



show annotations for term's descendants           Sort by:

Term paths to the root
Path 1
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        experimental_feature 0
          assembly_component 0
            contig 0
              BAC_read_contig 0
              contig_collection 0
              genomic_DNA_contig 0
              mRNA_contig 0
              mitochondrial_contig 0
              read + 0
              read_pair 0
Path 2
Term Annotations click to browse term
  SO ontology 0
    sequence_feature 0
      region 0
        experimental_feature 0
          assembly 0
            sequence_assembly 0
              partial_genomic_sequence_assembly 0
                ultracontig 0
                  supercontig 0
                    contig 0
                      BAC_read_contig 0
                      contig_collection 0
                      genomic_DNA_contig 0
                      mRNA_contig 0
                      mitochondrial_contig 0
                      read + 0
                      read_pair 0
paths to the root