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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:Crl:SD mutants
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Accession:RS:0004247 term browser browse the term
Synonyms:alt_id: RS:0003829



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SD-(Abcb1a- Abcb1b)em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-(Abcb1a- Abcb1b)em1Sage IEA RGD
SD-Abcb11em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb11em1Sage IEA RGD NCBI chr 3:54,016,854...54,112,797 JBrowse link
SD-Abcb1aem1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb1aem1Sage -/- SD-Abcb1aem1-/Abcb1aem1- IEA RGD NCBI chr 4:25,357,467...25,529,941 JBrowse link
SD-Abcb1aem1SageAbcg2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb1aem1Sage Abcg2em1Sage IEA RGD NCBI chr 4:25,357,467...25,529,941
NCBI chr 4:87,676,241...87,802,757
JBrowse link
SD-Abcc2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc2em1Sage IEA RGD NCBI chr 1:242,664,657...242,723,239 JBrowse link
SD-Abcc6em1Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em1Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em2Qlju+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju+/+ IEA RGD
SD-Abcc6em2Qlju+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju+/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em2Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em3Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em3Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em4Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em4Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em5Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em5Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcg2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcg2em1Sage IEA RGD NCBI chr 4:87,676,241...87,802,757 JBrowse link
SD-Add3em1Mcwi/ Roman term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Add3em1Mcwi/ Roman IEA RGD NCBI chr 1:252,147,341...252,255,126 JBrowse link
SD-Ahrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ahrem1Sage IEA RGD NCBI chr 6:52,234,089...52,271,568 JBrowse link
SD-Apoeem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Apoeem1Sage IEA RGD NCBI chr 1:79,353,924...79,357,852 JBrowse link
SD-Apoetm1(APOE*)Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Apoetm1(APOE*)Sage IEA RGD
SD-Appem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Appem1Sage IEA RGD NCBI chr11:24,019,774...24,236,584 JBrowse link
SD-Bdnfem1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bdnfem1Sage+/- IEA RGD NCBI chr 3:96,165,042...96,215,621 JBrowse link
SD-Cacna1cem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cacna1cem1Sage IEA RGD NCBI chr 4:151,764,138...152,379,454 JBrowse link
SD-Cd55em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cd55em4Mcwi IEA RGD NCBI chr13:41,857,242...41,885,966 JBrowse link
SD-Cd55em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cd55em6Mcwi IEA RGD NCBI chr13:41,857,242...41,885,966 JBrowse link
SD-Cftrem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem1Ang IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cftrem2Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem2Ang IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cntnap2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cntnap2em1Sage IEA RGD NCBI chr 4:74,109,455...76,366,434 JBrowse link
SD-Cpem1Ang+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang+/+ IEA RGD
SD-Cpem1Ang+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang+/- IEA RGD NCBI chr 2:102,439,433...102,498,075 JBrowse link
SD-Cpem1Ang-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang-/- IEA RGD NCBI chr 2:102,439,433...102,498,075 JBrowse link
SD-Disc1em1Rst term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Disc1em1Rst IEA RGD NCBI chr19:53,014,201...53,223,617 JBrowse link
SD-Dmdem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Dmdem1Ang IEA RGD NCBI chr  X:47,272,324...49,504,219 JBrowse link
SD-Eif2ak4em1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Eif2ak4em1 IEA RGD NCBI chr 3:105,356,261...105,441,630 JBrowse link
SD-Ephx2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ephx2em2Mcwi IEA RGD NCBI chr15:40,289,901...40,327,632 JBrowse link
SD-Fahem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fahem3Mcwi IEA RGD NCBI chr 1:138,548,830...138,571,599 JBrowse link
SD-Fmr1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fmr1em1Sage IEA RGD NCBI chr  X:147,240,239...147,278,057 JBrowse link
SD-Grm5em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Grm5em1Sage IEA RGD
SD-Htr7em1Msu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Htr7em1Msu IEA RGD NCBI chr 1:233,636,442...233,761,063 JBrowse link
SD-Ighmem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ighmem1Ang IEA RGD
SD-Ighmem2Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ighmem2Ang IEA RGD
SD-Il2rgem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem1Ang IEA RGD NCBI chr  X:66,395,330...66,399,026 JBrowse link
SD-Il2rgem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem2Mcwi IEA RGD
SD-Il2rgem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem3Mcwi IEA RGD NCBI chr  X:66,395,330...66,399,026 JBrowse link
SD-Kcnk3em1Ang-/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Kcnk3em1Ang-/+ IEA RGD NCBI chr 6:25,761,487...25,799,153 JBrowse link
SD-Kcnk3em1Ang-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Kcnk3em1Ang-/- IEA RGD NCBI chr 6:25,761,487...25,799,153 JBrowse link
SD-Ldlrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ldlrem1Sage IEA RGD NCBI chr 8:20,270,020...20,292,981 JBrowse link
SD-Lepem1Sage+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage+/+ IEA RGD
SD-Lepem1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage+/- IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Lepem1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage-/- IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Leprem4Lizh term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Leprem4Lizh IEA RGD
SD-Lrp5em1Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em1Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em1Vari/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em1Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em2Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em2Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em2VariRrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em2Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em3Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em3Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em3Vari/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em3Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Metem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Metem1Sage IEA RGD NCBI chr 4:45,790,456...45,898,139 JBrowse link
SD-Nfe2l2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi IEA RGD NCBI chr 3:60,594,239...60,621,785 JBrowse link
SD-Nfe2l2em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/+ SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi+ IEA RGD
SD-Nfe2l2em1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/- SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi- IEA RGD
SD-Nfe2l2em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi-/- SD-Nfe2l2em1Mcwi-/Nfe2l2em1Mcwi- IEA RGD NCBI chr 3:60,594,239...60,621,785 JBrowse link
SD-Nlgn3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nlgn3em1Sage IEA RGD NCBI chr  X:66,427,926...66,457,378 JBrowse link
SD-Nr1i2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage IEA RGD NCBI chr11:62,460,213...62,496,665 JBrowse link
SD-Nr1i2em1Sage Nr1i3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage Nr1i3em1Sage IEA RGD NCBI chr13:83,632,940...83,638,193
NCBI chr11:62,460,213...62,496,665
JBrowse link
SD-Nr1i2em1Sage Nr1i3em1Sage Ahrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage Nr1i3em1Sage Ahrem1Sage IEA RGD NCBI chr13:83,632,940...83,638,193
NCBI chr11:62,460,213...62,496,665
NCBI chr 6:52,234,089...52,271,568
JBrowse link
SD-Nr1i3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i3em1Sage IEA RGD NCBI chr13:83,632,940...83,638,193 JBrowse link
SD-Nrxn1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nrxn1em1Sage IEA RGD NCBI chr 6:3,177,788...4,323,848 JBrowse link
SD-Prkdcem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Prkdcem1Sage IEA RGD NCBI chr11:85,040,790...85,258,357 JBrowse link
SD-Ptenem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ptenem1Sage IEA RGD NCBI chr 1:230,631,303...230,696,754 JBrowse link
SD-Rag1em1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1em1Ang IEA RGD NCBI chr 3:87,917,061...87,928,158 JBrowse link
SD-Rag1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1em1Sage IEA RGD NCBI chr 3:87,917,061...87,928,158 JBrowse link
SD-Rag2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em1Sage IEA RGD NCBI chr 3:87,902,373...87,910,227 JBrowse link
SD-Rag2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em2Mcwi IEA RGD NCBI chr 3:87,902,373...87,910,227 JBrowse link
SD-Rag2em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em3Mcwi IEA RGD NCBI chr 3:87,902,373...87,910,227 JBrowse link
SD-Rag2em3McwiIl2rgem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em3McwiIl2rgem2Mcwi IEA RGD NCBI chr 3:87,902,373...87,910,227
NCBI chr  X:66,395,330...66,399,026
JBrowse link
SD-Rarres2em1Msu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rarres2em1Msu IEA RGD NCBI chr 4:77,522,549...77,525,733 JBrowse link
SD-ROSA26em1(Epac-SH187)Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-ROSA26em1(Epac-SH187)Mcwi IEA RGD
SD-Scn9a*tm1Amgn/Crl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Scn9a*tm1Amgn/Crl IEA RGD NCBI chr 3:51,145,148...51,293,342 JBrowse link
SD-Slc22a1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a1em1Sage IEA RGD NCBI chr 1:48,076,657...48,103,679 JBrowse link
SD-Slc22a2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a2em1Sage IEA RGD NCBI chr 1:48,121,061...48,163,268 JBrowse link
SD-Slc22a6em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a6em1Sage IEA RGD NCBI chr 1:205,522,579...205,531,179 JBrowse link
SD-Slc22a8em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a8em1Sage IEA RGD
SD-Slc6a3tm1(IRES-cre)Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc6a3tm1(IRES-cre)Sage IEA RGD
S SD-Thtm1(IRES-cre)Sage IEA RGD
SD-Thtm1(IRES-cre)Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Thtm1(IRES-cre)Sage IEA RGD
SD-Tp53em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tp53em1Sage IEA RGD NCBI chr10:54,300,070...54,311,525 JBrowse link
SD-Tp53em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tp53em3Mcwi IEA RGD NCBI chr10:54,300,070...54,311,525 JBrowse link
SD-Trpv1em1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Trpv1em1Sage-/- IEA RGD NCBI chr10:57,851,428...57,876,513 JBrowse link
SD-Tspoem1Vpl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tspoem1Vpl IEA RGD NCBI chr 7:114,720,188...114,730,450 JBrowse link
SD-Tspoem2Vpl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tspoem2Vpl IEA RGD NCBI chr 7:114,720,188...114,730,450 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6449
    mutant strain 1310
      SD mutants 220
        Crl:SD mutants 87
          Crl:SD (CRISPR/Cas9) mutants + 21
          Crl:SD (TALEN) mutants + 12
          Crl:SD (ZFN) mutants + 43
          CrlQlju:SD (ZFN) mutants + 7
          SD-Apoetm1(APOE*)Sage 1
          SD-Kcnk3em1Ang-/- 1
          SD-Slc6a3tm1(IRES-cre)Sage 2
          SD-Thtm1(IRES-cre)Sage 1
paths to the root