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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:SD (ZFN) mutants
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Accession:RS:0004183 term browser browse the term



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SD-(Abcb1a- Abcb1b)em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-(Abcb1a- Abcb1b)em1Sage IEA RGD
SD-Abcb11em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb11em1Sage IEA RGD NCBI chr 3:54,016,854...54,112,797 JBrowse link
SD-Abcb1aem1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb1aem1Sage -/- SD-Abcb1aem1-/Abcb1aem1- IEA RGD NCBI chr 4:25,357,467...25,529,941 JBrowse link
SD-Abcb1aem1SageAbcg2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcb1aem1Sage Abcg2em1Sage IEA RGD NCBI chr 4:25,357,467...25,529,941
NCBI chr 4:87,676,241...87,802,757
JBrowse link
SD-Abcc2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc2em1Sage IEA RGD NCBI chr 1:242,664,657...242,723,239 JBrowse link
SD-Abcc6em1Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em1Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em2Qlju+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju+/+ IEA RGD
SD-Abcc6em2Qlju+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju+/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em2Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em2Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em3Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em3Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em4Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em4Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcc6em5Qlju-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc6em5Qlju-/- IEA RGD NCBI chr 1:96,447,224...96,501,464 JBrowse link
SD-Abcg2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcg2em1Sage IEA RGD NCBI chr 4:87,676,241...87,802,757 JBrowse link
SD-Add3em1Mcwi/ Roman term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Add3em1Mcwi/ Roman IEA RGD NCBI chr 1:252,147,341...252,255,126 JBrowse link
SD-Ahrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ahrem1Sage IEA RGD NCBI chr 6:52,234,089...52,271,568 JBrowse link
SD-Ahrem2Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ahrem2Sage IEA RGD NCBI chr 6:52,234,089...52,271,568 JBrowse link
SD-Apoeem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Apoeem1Sage IEA RGD NCBI chr 1:79,353,924...79,357,852 JBrowse link
SD-Appem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Appem1Sage IEA RGD NCBI chr11:24,019,774...24,236,584 JBrowse link
SD-Bace1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bace1em1Sage IEA RGD NCBI chr 8:46,142,060...46,166,268 JBrowse link
SD-Bace1em1Sage+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bace1em1Sage+/+ SD-Bace1em1Sage+/Bace1em1Sage+ IEA RGD
SD-Bace1em1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bace1em1Sage+/- SD-Bace1em1Sage+/Bace1em1Sage- IEA RGD NCBI chr 8:46,142,060...46,166,268 JBrowse link
SD-Bace1em1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bace1em1Sage-/- SD-Bace1em1Sage-/Bace1em1Sage- IEA RGD NCBI chr 8:46,142,060...46,166,268 JBrowse link
SD-Bdnfem1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bdnfem1Sage+/- IEA RGD NCBI chr 3:96,165,042...96,215,621 JBrowse link
SD-Cacna1cem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cacna1cem1Sage IEA RGD NCBI chr 4:151,764,138...152,379,454 JBrowse link
SD-Cftrem1Sage+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem1Sage+/+ IEA RGD
SD-Cftrem1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem1Sage+/- IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cftrem1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem1Sage-/- IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cntnap2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cntnap2em1Sage IEA RGD NCBI chr 4:74,109,455...76,366,434 JBrowse link
SD-ESR1em1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Esr1em1Soar IEA RGD NCBI chr 1:41,106,335...41,499,104 JBrowse link
SD-Esr2em1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Esr2em1Soar IEA RGD NCBI chr 6:94,858,438...94,909,630 JBrowse link
SD-Esr2em2Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Esr2em2Soar IEA RGD
SD-F8em1Sage+/-/Novo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-F8em1Sage+/-/Novo IEA RGD NCBI chr18:140,848...172,330 JBrowse link
SD-F8em1Sage-/-/Novo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-F8em1Sage-/-/Novo IEA RGD NCBI chr18:140,848...172,330 JBrowse link
SD-F8em1Sage/Novo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-F8em1Sage/Novo IEA RGD NCBI chr18:140,848...172,330 JBrowse link
SD-Fmr1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fmr1em1Sage IEA RGD NCBI chr  X:147,240,239...147,278,057 JBrowse link
SD-Grm5em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Grm5em1Sage IEA RGD
SD-Ighmem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ighmem1Ang IEA RGD
SD-Ighmem2Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ighmem2Ang IEA RGD
SD-Il15em1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il15em1Soar IEA RGD NCBI chr19:25,640,013...25,706,818 JBrowse link
SD-Ldlrem1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ldlrem1 IEA RGD NCBI chr 8:20,270,020...20,292,981 JBrowse link
SD-Ldlrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ldlrem1Sage IEA RGD NCBI chr 8:20,270,020...20,292,981 JBrowse link
SD-Lepem1Sage+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage+/+ IEA RGD
SD-Lepem1Sage+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage+/- IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Lepem1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Sage-/- IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Metem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Metem1Sage IEA RGD NCBI chr 4:45,790,456...45,898,139 JBrowse link
SD-Mstnem1Cqin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Mstnem1Cqin IEA RGD
SD-Nlgn3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nlgn3em1Sage IEA RGD NCBI chr  X:66,427,926...66,457,378 JBrowse link
SD-Nr1i2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage IEA RGD NCBI chr11:62,460,213...62,496,665 JBrowse link
SD-Nr1i2em1Sage Nr1i3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage Nr1i3em1Sage IEA RGD NCBI chr13:83,632,940...83,638,193
NCBI chr11:62,460,213...62,496,665
JBrowse link
SD-Nr1i2em1Sage Nr1i3em1Sage Ahrem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i2em1Sage Nr1i3em1Sage Ahrem1Sage IEA RGD NCBI chr13:83,632,940...83,638,193
NCBI chr11:62,460,213...62,496,665
NCBI chr 6:52,234,089...52,271,568
JBrowse link
SD-Nr1i3em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nr1i3em1Sage IEA RGD NCBI chr13:83,632,940...83,638,193 JBrowse link
SD-Nrxn1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nrxn1em1Sage IEA RGD NCBI chr 6:3,177,788...4,323,848 JBrowse link
SD-Pde4bem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pde4bem1Sage IEA RGD NCBI chr 5:116,799,827...117,367,707 JBrowse link
SD-Pgrem2Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pgrem2Soar IEA RGD
SD-Prkdcem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Prkdcem1Sage IEA RGD NCBI chr11:85,040,790...85,258,357 JBrowse link
SD-Ptenem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ptenem1Sage IEA RGD NCBI chr 1:230,631,303...230,696,754 JBrowse link
SD-Rag1em1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1em1Ang IEA RGD NCBI chr 3:87,917,061...87,928,158 JBrowse link
SD-Rag1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1em1Sage IEA RGD NCBI chr 3:87,917,061...87,928,158 JBrowse link
SD-Rag2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em1Sage IEA RGD NCBI chr 3:87,902,373...87,910,227 JBrowse link
SD-Scn9a*tm1Amgn/Crl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Scn9a*tm1Amgn/Crl IEA RGD NCBI chr 3:51,145,148...51,293,342 JBrowse link
SD-Shank2em13Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Shank2em13Sage IEA RGD NCBI chr 1:199,146,210...199,590,962 JBrowse link
SD-Shank3em1Bux term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Shank3em1Bux IEA RGD NCBI chr 7:120,568,707...120,630,796 JBrowse link
SD-Slc22a1em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a1em1Sage IEA RGD NCBI chr 1:48,076,657...48,103,679 JBrowse link
SD-Slc22a2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a2em1Sage IEA RGD NCBI chr 1:48,121,061...48,163,268 JBrowse link
SD-Slc22a6em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a6em1Sage IEA RGD NCBI chr 1:205,522,579...205,531,179 JBrowse link
SD-Slc22a8em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc22a8em1Sage IEA RGD
SD-Tp53em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tp53em1Sage IEA RGD NCBI chr10:54,300,070...54,311,525 JBrowse link
SD-Tp53em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tp53em3Mcwi IEA RGD NCBI chr10:54,300,070...54,311,525 JBrowse link
SD-Trim63em1(hiLuc)/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Trim63em1(hiLuc)/Rrrc IEA RGD NCBI chr 5:146,533,492...146,547,332 JBrowse link
SD-Trpv1em1Sage-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Trpv1em1Sage-/- IEA RGD NCBI chr10:57,851,428...57,876,513 JBrowse link
SD-Tspoem1Vpl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tspoem1Vpl IEA RGD NCBI chr 7:114,720,188...114,730,450 JBrowse link
SD-Tspoem2Vpl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tspoem2Vpl IEA RGD NCBI chr 7:114,720,188...114,730,450 JBrowse link
SD-Wfs1em1Ptsn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Wfs1em1Ptsn IEA RGD NCBI chr14:73,810,478...73,834,993 JBrowse link
SD-Wfs1em2Ptsn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Wfs1em2Ptsn IEA RGD NCBI chr14:73,810,478...73,834,993 JBrowse link
SD-Wfs1em3Ptsn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Wfs1em3Ptsn IEA RGD NCBI chr14:73,810,478...73,834,993 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6455
    mutant strain 1314
      SD mutants 223
        SD (ZFN) mutants 75
          Crl:SD (ZFN) mutants + 43
          CrlQlju:SD (ZFN) mutants + 7
          HsdHot:SD (ZFN) mutants + 5
          HsdHot:SD (ZFN) mutants (chr 19) + 1
          SD-Ahrem2Sage 1
          SD-Bace1em1Sage + 4
          SD-Cftrem1Sage+/+ 1
          SD-Cftrem1Sage+/- 1
          SD-Cftrem1Sage-/- 1
          SD-F8em1Sage/Novo + 3
          SD-Ldlrem1 1
          SD-Mstnem1Cqin 1
          SD-Pde4bem1Sage 1
          SD-Shank2em13Sage 1
          SD-Shank2em13Sage 1
          SD-Shank3em1Bux 1
          SD-Trim63em1(hiLuc)/Rrrc 1
          SD-Wfs1em1Ptsn 1
          SD-Wfs1em2Ptsn 1
          SD-Wfs1em3Ptsn 1
paths to the root