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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:SD (CRISPR/Cas9) mutants
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Accession:RS:0003954 term browser browse the term



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CD-Ctnsem2Vjupk term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S CD-Ctnsem2Vjupk IEA RGD NCBI chr10:57,801,551...57,817,213 JBrowse link
CD-Ctnsem3Vjupk term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S CD-Ctnsem3Vjupk IEA RGD NCBI chr10:57,801,551...57,817,213 JBrowse link
CD-Ctnsem4Vjupk term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S CD-Ctnsem4Vjupk IEA RGD NCBI chr10:57,801,551...57,817,213 JBrowse link
SD- Ngly1em1Ta-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ngly1em1Ta-/- IEA RGD NCBI chr15:9,153,738...9,210,228 JBrowse link
SD-Adgrl3em1Huyc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Adgrl3em1Huyc IEA RGD NCBI chr14:26,336,320...27,104,060 JBrowse link
SD-Ahrem1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ahrem1Soar IEA RGD NCBI chr 6:52,234,089...52,271,568 JBrowse link
SD-Bmal1em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Bmal1em1Mcwi IEA RGD NCBI chr 1:167,331,756...167,430,235 JBrowse link
SD-Brca1em1Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Brca1em1Kyo IEA RGD NCBI chr10:86,417,441...86,477,762 JBrowse link
SD-Ccdc39em1Jgn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ccdc39em1Jgn IEA RGD NCBI chr 2:116,665,261...116,703,364 JBrowse link
SD-Cd55em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cd55em4Mcwi IEA RGD NCBI chr13:41,857,242...41,885,966 JBrowse link
SD-Cd55em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cd55em6Mcwi IEA RGD NCBI chr13:41,857,242...41,885,966 JBrowse link
SD-Cd59em1Ask-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cd59em1Ask-/- SD-Cd59em1-/Cd59em1- IEA RGD NCBI chr 3:90,459,085...90,477,571 JBrowse link
SD-Cftrem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem1Ang IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cftrem2Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cftrem2Ang IEA RGD NCBI chr 4:46,561,269...46,728,759 JBrowse link
SD-Cpem1Ang+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang+/+ IEA RGD
SD-Cpem1Ang+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang+/- IEA RGD NCBI chr 2:102,439,433...102,498,075 JBrowse link
SD-Cpem1Ang-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cpem1Ang-/- IEA RGD NCBI chr 2:102,439,433...102,498,075 JBrowse link
SD-Crhem1Ionsz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Crhem1Ionsz IEA RGD NCBI chr 2:102,143,055...102,144,919 JBrowse link
SD-Cyp2c11em1Nju term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cyp2c11em1Nju IEA RGD NCBI chr 1:236,762,719...236,799,069 JBrowse link
SD-Cyp3a23/3a1em1Myliu,Cyp3a2em1Myliu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Cyp3a23/3a1em1Myliu,Cyp3a2em1Myliu IEA RGD NCBI chr12:9,207,986...9,230,038
NCBI chr12:9,256,159...9,285,020
JBrowse link
SD-Ddah1em1Ywxu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ddah1em1Ywxu IEA RGD NCBI chr 2:234,667,499...234,800,322 JBrowse link
SD-Defb23em1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Defb23em1Mlit IEA RGD NCBI chr 3:140,923,474...140,927,686 JBrowse link
SD-Defb23em2MlitDefb26em2Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Defb23em2MlitDefb26em2Mlit IEA RGD
SD-Defb23em2MlitDefb26em2MlitDefb42em1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Defb23em2MlitDefb26em2MlitDefb42em1Mlit IEA RGD NCBI chr15:37,234,751...37,241,568 JBrowse link
SD-Defb26em1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Defb26em1Mlit IEA RGD NCBI chr 3:140,977,489...140,980,893 JBrowse link
SD-Defb42em1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Defb42em1Mlit IEA RGD NCBI chr15:37,234,751...37,241,568 JBrowse link
SD-Disc1em1Rst term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Disc1em1Rst IEA RGD NCBI chr19:53,014,201...53,223,617 JBrowse link
SD-Drd1em1Ionsz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Drd1em1Ionsz IEA RGD NCBI chr17:10,540,440...10,544,971 JBrowse link
SD-Eif2ak4em1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Eif2ak4em1 IEA RGD NCBI chr 3:105,356,261...105,441,630 JBrowse link
SD-Ephx2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ephx2em2Mcwi IEA RGD NCBI chr15:40,289,901...40,327,632 JBrowse link
SD-Ercc6em1Cgen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ercc6em1Cgen IEA RGD NCBI chr16:7,764,983...7,835,587 JBrowse link
SD-Flnaem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Flnaem1Ang IEA RGD NCBI chr  X:152,007,758...152,034,266 JBrowse link
SD-Fmr1em1Mzhe term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fmr1em1Mzhe IEA RGD NCBI chr  X:147,240,239...147,278,057 JBrowse link
SD-Fusem1Ionsz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fusem1Ionsz IEA RGD NCBI chr 1:182,576,479...182,590,417 JBrowse link
SD-Gcgtm1(iCre)Lrina term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gcgtm1(iCre)Lrina IEA RGD
SD-Gcgtm1(iCre)Lrina/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gcgtm1(iCre)Lrina/Rrrc IEA RGD
SD-Gfapem1Ionsz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gfapem1(2A-Chr2-EYFP)Ionsz IEA RGD
SD-Gfapem1Mes /Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gfapem1Mes /Rrrc IEA RGD NCBI chr10:87,852,891...87,861,631 JBrowse link
SD-Gfapem2Mes /Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gfapem2Mes /Rrrc IEA RGD NCBI chr10:87,852,891...87,861,631 JBrowse link
SD-Gnalem1Hpng+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gnalem1Hpng+/- IEA RGD NCBI chr18:60,622,311...60,762,599 JBrowse link
SD-Gnalem1Hpng-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Gnalem1Hpng-/- IEA RGD NCBI chr18:60,622,311...60,762,599 JBrowse link
SD-Htr7em1Msu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Htr7em1Msu IEA RGD NCBI chr 1:233,636,442...233,761,063 JBrowse link
SD-Kcnk3em1Ang-/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Kcnk3em1Ang-/+ IEA RGD NCBI chr 6:25,761,487...25,799,153 JBrowse link
SD-L1camem1Jgn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-L1camem1Jgn IEA RGD NCBI chr  X:151,597,270...151,623,776 JBrowse link
SD-L1camem2Jgn term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-L1camem2Jgn IEA RGD NCBI chr  X:151,597,270...151,623,776 JBrowse link
SD-Lepem1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1 IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Lepem1Narl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lepem1Narl IEA RGD NCBI chr 4:57,661,127...57,675,262 JBrowse link
SD-Leprem4Lizh term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Leprem4Lizh IEA RGD
SD-Lrp5em1Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em1Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em1Vari/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em1Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em2Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em2Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em2VariRrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em2Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em3Vari term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em3Vari IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Lrp5em3Vari/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lrp5em3Vari/Rrrc IEA RGD NCBI chr 1:200,814,247...200,917,581 JBrowse link
SD-Mir146bem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Mir146bem1Mcwi IEA RGD NCBI chr 1:245,203,438...245,203,525 JBrowse link
SD-Mir31em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Mir31em1Sage IEA RGD
SD-Myh7bem1Blar+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Myh7bem1Blar+/+ IEA RGD
SD-Myh7bem1Blar+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Myh7bem1Blar+/- IEA RGD NCBI chr 3:144,076,911...144,122,714 JBrowse link
SD-Myh7bem1Blar-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Myh7bem1Blar-/- IEA RGD NCBI chr 3:144,076,911...144,122,714 JBrowse link
SD-Pde3aem1Bdr term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pde3aem1Bdr IEA RGD NCBI chr 4:174,172,804...174,443,944 JBrowse link
SD-Pde3aem2Bdr term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pde3aem2Bdr IEA RGD NCBI chr 4:174,172,804...174,443,944 JBrowse link
SD-Pde3aem3Bdr term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pde3aem3Bdr IEA RGD NCBI chr 4:174,172,804...174,443,944 JBrowse link
SD-Pde6bem1Cgen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pde6bem1Cgen IEA RGD NCBI chr14:1,323,310...1,366,450 JBrowse link
SD-Pgrem1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pgrem1Soar IEA RGD NCBI chr 8:6,073,216...6,131,552 JBrowse link
SD-Pgrem2Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pgrem2Soar IEA RGD
SD-Pon1em1Lizh term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pon1em1Lizh IEA RGD NCBI chr 4:33,294,737...33,325,759 JBrowse link
SD-Rarres2em1Msu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rarres2em1Msu IEA RGD NCBI chr 4:77,522,549...77,525,733 JBrowse link
SD-Rnaset2em1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rnaset2em1Sage IEA RGD NCBI chr 1:52,576,344...52,603,151 JBrowse link
SD-ROSA26 em1(LTR-nLuc)Ottc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-ROSA26 em1(LTR-nLuc)Ottc IEA RGD
SD-ROSA26em1(Epac-SH187)Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-ROSA26em1(Epac-SH187)Mcwi IEA RGD
SD-ROSA26em1(LTR-nLuc)Ottc/Rrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-ROSA26em1(LTR-nLuc)Ottc/Rrrc IEA RGD
SD-Slc9a6 em1Moro term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slc9a6 em1Moro IEA RGD NCBI chr  X:134,430,588...134,486,747 JBrowse link
SD-Slco1b2em1Myliu term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Slco1b2em1Myliu IEA RGD NCBI chr 4:174,551,463...174,619,988 JBrowse link
SD-Sncaem1Sage term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Sncaem1Sage IEA RGD
SD-Trpa1em1Gne term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Trpa1em1Gne IEA RGD NCBI chr 5:4,379,999...4,433,243 JBrowse link
SD-Tshrem1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Tshrem1Mlit IEA RGD NCBI chr 6:110,341,585...110,475,297 JBrowse link
SD-Ubdem1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ubdem1 IEA RGD NCBI chr20:1,385,487...1,387,438 JBrowse link
SD-Ube3aem1Jue term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ube3aem1Jue IEA RGD NCBI chr 1:110,070,260...110,161,675 JBrowse link
SD-Uoxem1Cya term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Uoxem1Cya IEA RGD NCBI chr 2:235,486,867...235,523,053 JBrowse link
SD-Vcpem1Ionsz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Vcpem1Ionsz IEA RGD

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6522
    mutant strain 1342
      SD mutants 241
        SD (CRISPR/Cas9) mutants 80
          CD-Ctnsem2Vjupk 1
          CD-Ctnsem3Vjupk 1
          CD-Ctnsem4Vjupk 1
          Crl:SD (CRISPR/Cas9) mutants + 22
          HsdHot:SD (CRISPR/Cas9) mutants + 2
          SD (CRISPR/Cas9) mutants (chr 10) + 1
          SD (CRISPR/Cas9) mutants (chr 17) + 1
          SD (CRISPR/Cas9) mutants (chr 5) + 1
          SD (CRISPR/Cas9) mutants (chr 8) + 2
          SD- Ngly1em1Ta-/- 1
          SD-Adgrl3em1Huyc 1
          SD-Brca1em1Kyo 1
          SD-Ccdc39em1Jgn 1
          SD-Cd59em1Ask-/- 1
          SD-Crhem1Ionsz 1
          SD-Cyp2c11em1Nju 1
          SD-Cyp3a23/3a1em1Myliu,Cyp3a2em1Myliu 1
          SD-Ddah1em1Ywxu 1
          SD-Defb23em1Mlit 1
          SD-Defb23em2MlitDefb26em2Mlit 1
          SD-Defb23em2MlitDefb26em2MlitDefb42em1Mlit 1
          SD-Defb26em1Mlit 1
          SD-Defb42em1Mlit 1
          SD-Drd1em1Ionsz 1
          SD-Ercc6em1Cgen 1
          SD-Flnaem1Ang 1
          SD-Fmr1em1Mzhe 1
          SD-Fusem1Ionsz 1
          SD-GCDHem1Dba 0
          SD-Gcgtm1(iCre)Lrina + 2
          SD-Gfapem1Ionsz 1
          SD-Gfapem1Mes /Rrrc 1
          SD-Gfapem2Mes /Rrrc 1
          SD-Gnalem1Hpng+/- 1
          SD-Gnalem1Hpng-/- 1
          SD-L1camem1Jgn 1
          SD-L1camem2Jgn 1
          SD-Lepem1 1
          SD-Lepem1Narl 1
          SD-Mir146bem1Mcwi 1
          SD-Mir31em1Sage 1
          SD-Myh7bem1Blar+/+ 1
          SD-Myh7bem1Blar+/- 1
          SD-Myh7bem1Blar-/- 1
          SD-Pde3aem1Bdr 1
          SD-Pde3aem2Bdr 1
          SD-Pde3aem3Bdr 1
          SD-Pde6bem1Cgen 1
          SD-Pon1em1Lizh 1
          SD-ROSA26 em1(LTR-nLuc)Ottc + 2
          SD-Rnaset2em1Sage 1
          SD-Slc9a6 em1Moro 1
          SD-Slco1b2em1Myliu 1
          SD-Sncaem1Sage 1
          SD-Trpa1em1Gne 1
          SD-Tshrem1Mlit 1
          SD-Ubdem1 1
          SD-Ube3aem1Jue 1
          SD-Uoxem1Cya 1
          SD-Vcpem1Ionsz 1
paths to the root