Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Projects (beta) QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:chromosome 13 mutant
go back to main search page
Accession:RS:0002769 term browser browse the term


show annotations for term's descendants           Sort by:
F344-Brinp3Tn(sb-T2/Bart3)2.189Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Brinp3Tn(sb-T2/Bart3)2.189Mcwi IEA RGD NCBI chr13:58,413,883...58,846,828 JBrowse link
F344-FaslgTn(sb-T2/Bart3)2.325Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-FaslgTn(sb-T2/Bart3)2.325Mcwi IEA RGD NCBI chr13:74,151,519...74,172,760 JBrowse link
F344-Pld5Tn(sb-T2/Bart3)2.340Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Pld5Tn(sb-T2/Bart3)2.340Mcwi IEA RGD NCBI chr13:87,895,694...88,232,868 JBrowse link
F344-Spta1Tn(sb-T2/Bart3)2.315Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Spta1Tn(sb-T2/Bart3)2.315Mcwi IEA RGD NCBI chr13:86,203,504...86,279,371 JBrowse link
F344-Tmco1Tn(sb-T2/Bart3)2.135Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Tmco1Tn(sb-T2/Bart3)2.135Mcwi IEA RGD NCBI chr13:79,460,229...79,483,557 JBrowse link
SS-Adora1em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em3Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Adora1em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em4Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Cd247em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd247em3Mcwi IEA RGD NCBI chr13:78,043,302...78,118,437 JBrowse link
SS-Cd247em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd247em5Mcwi IEA RGD NCBI chr13:78,043,302...78,118,437 JBrowse link
SS-Chr 13BN-Mir29bem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Chr 13BN-Mir29bem1Mcwi IEA RGD NCBI chr 4:59,650,987...59,651,067 JBrowse link
SS-Kcnj10em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em1Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Kcnj10em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em3Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Nckap5em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi+/+ SS-Nckap5em1Mcwi+/Nckap5em1Mcwi+ IEA RGD
SS-Nckap5em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi-/- SS-Nckap5em1Mcwi-/Nckap5em1Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em2Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi+/+ SS-Nckap5em2Mcwi+/Nckap5em2Mcwi+ IEA RGD
SS-Nckap5em2Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi-/- SS-Nckap5em2Mcwi-/Nckap5em2Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em3Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi+/+ SS-Nckap5em3Mcwi+/Nckap5em3Mcwi+ IEA RGD
SS-Nckap5em3Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi-/- SS-Nckap5em3Mcwi-/Nckap5em3Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Pdcem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pdcem2Mcwi IEA RGD NCBI chr13:62,297,281...62,371,754 JBrowse link
SS-Renem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi IEA RGD NCBI chr13:44,803,412...44,803,421 JBrowse link
SS-Renem1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi+/+ SS-Renem1Mcwi+/Renem1Mcwi+ IEA RGD
SS-Renem1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi+/- SS-Renem1Mcwi+/Renem1Mcwi- IEA RGD NCBI chr13:44,803,412...44,803,421 JBrowse link
SS-Renem1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi-/- SS-Renem1Mcwi-/Renem1Mcwi- IEA RGD NCBI chr13:44,803,412...44,803,421 JBrowse link
SS-Rfwd2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rfwd2em1Mcwi IEA RGD NCBI chr13:71,467,164...71,561,826 JBrowse link
SS.BN-(D13Rat151-D13Rat197)-Serpinc1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat151-D13Rat197)-Serpinc1em2Mcwi IEA RGD NCBI chr13:73,257,208...73,271,476 JBrowse link
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/+ SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/Nckap5em4Mcwi+ IEA RGD
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/+ SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/Nckap5em4Mcwi+ IEA RGD
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/- SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/Nckap5em4Mcwi- IEA RGD
WI;WDB-Kiss1tm1Nips term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S WI;WDB-Kiss1tm1Nips IEA RGD NCBI chr13:44,775,106...44,780,707 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6622
    mutant strain 1368
      chromosome 13 mutant 33
        Crlj:WI mutants (chr 13) + 1
        F344/NHsd (sleeping beauty) mutants (chr 13) + 5
        SS-Chr 13BN mutants + 6
        SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi (CRISPR/Cas9) mutants (chr 13) 0
        SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 13) + 5
        SS/JrHsdMcwi (ZFN) mutants (chr 13) + 16
Path 2
Term Annotations click to browse term
  rat strain 6622
    chromosome altered 2397
      chromosome 13 147
        chromosome 13 mutant 33
          Crlj:WI mutants (chr 13) + 1
          F344/NHsd (sleeping beauty) mutants (chr 13) + 5
          SS-Chr 13BN mutants + 6
          SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi (CRISPR/Cas9) mutants (chr 13) 0
          SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 13) + 5
          SS/JrHsdMcwi (ZFN) mutants (chr 13) + 16
paths to the root