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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:chromosome 13 mutant
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Accession:RS:0002769 term browser browse the term



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F344-Brinp3Tn(sb-T2/Bart3)2.189Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Brinp3Tn(sb-T2/Bart3)2.189Mcwi IEA RGD NCBI chr13:58,413,883...58,846,828 JBrowse link
F344-FaslgTn(sb-T2/Bart3)2.325Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-FaslgTn(sb-T2/Bart3)2.325Mcwi IEA RGD NCBI chr13:74,151,519...74,172,760 JBrowse link
F344-Pld5Tn(sb-T2/Bart3)2.340Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Pld5Tn(sb-T2/Bart3)2.340Mcwi IEA RGD NCBI chr13:87,895,694...88,232,868 JBrowse link
F344-Spta1Tn(sb-T2/Bart3)2.315Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Spta1Tn(sb-T2/Bart3)2.315Mcwi IEA RGD NCBI chr13:86,203,504...86,279,371 JBrowse link
F344-Tmco1Tn(sb-T2/Bart3)2.135Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Tmco1Tn(sb-T2/Bart3)2.135Mcwi IEA RGD NCBI chr13:79,460,229...79,483,557 JBrowse link
SS-Adora1em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em3Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Adora1em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em4Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Cd247em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd247em3Mcwi IEA RGD NCBI chr13:78,043,302...78,118,437 JBrowse link
SS-Cd247em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd247em5Mcwi IEA RGD NCBI chr13:78,043,302...78,118,437 JBrowse link
SS-Chr 13BN-Mir29bem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Chr 13BN-Mir29bem1Mcwi IEA RGD NCBI chr 4:59,650,987...59,651,067 JBrowse link
SS-Kcnj10em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em1Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Kcnj10em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em3Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Nckap5em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi+/+ SS-Nckap5em1Mcwi+/Nckap5em1Mcwi+ IEA RGD
SS-Nckap5em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em1Mcwi-/- SS-Nckap5em1Mcwi-/Nckap5em1Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em2Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi+/+ SS-Nckap5em2Mcwi+/Nckap5em2Mcwi+ IEA RGD
SS-Nckap5em2Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em2Mcwi-/- SS-Nckap5em2Mcwi-/Nckap5em2Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Nckap5em3Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi+/+ SS-Nckap5em3Mcwi+/Nckap5em3Mcwi+ IEA RGD
SS-Nckap5em3Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nckap5em3Mcwi-/- SS-Nckap5em3Mcwi-/Nckap5em3Mcwi- IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS-Pdcem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pdcem2Mcwi IEA RGD NCBI chr13:62,297,281...62,371,754 JBrowse link
SS-Renem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi IEA RGD NCBI chr13:44,796,260...44,807,491 JBrowse link
SS-Renem1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi+/+ SS-Renem1Mcwi+/Renem1Mcwi+ IEA RGD
SS-Renem1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi+/- SS-Renem1Mcwi+/Renem1Mcwi- IEA RGD NCBI chr13:44,796,260...44,807,491 JBrowse link
SS-Renem1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Renem1Mcwi-/- SS-Renem1Mcwi-/Renem1Mcwi- IEA RGD NCBI chr13:44,796,260...44,807,491 JBrowse link
SS-Rfwd2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rfwd2em1Mcwi IEA RGD NCBI chr13:71,467,164...71,561,826 JBrowse link
SS.BN-(D13Rat151-D13Rat197)-Serpinc1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat151-D13Rat197)-Serpinc1em2Mcwi IEA RGD NCBI chr13:73,257,208...73,271,476 JBrowse link
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi IEA RGD NCBI chr13:37,369,948...38,283,257 JBrowse link
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/+ SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi+/Nckap5em4Mcwi+ IEA RGD
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/+ SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/Nckap5em4Mcwi+ IEA RGD
SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/- SS.BN-(D13Rat20-D13Got22)/Mcwi-Nckap5em4Mcwi-/Nckap5em4Mcwi- IEA RGD
WI-Kiss1tm1Nips term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S WI-Kiss1tm1Nips IEA RGD NCBI chr13:44,774,823...44,780,707 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6480
    mutant strain 1325
      chromosome 13 mutant 33
        Crlj:WI mutants (chr 13) + 1
        F344/NHsd (sleeping beauty) mutants (chr 13) + 5
        SS-Chr 13BN mutants + 6
        SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi (CRISPR/Cas9) mutants (chr 13) 0
        SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 13) + 5
        SS/JrHsdMcwi (ZFN) mutants (chr 13) + 16
Path 2
Term Annotations click to browse term
  rat strain 6480
    chromosome altered 2391
      chromosome 13 147
        chromosome 13 mutant 33
          Crlj:WI mutants (chr 13) + 1
          F344/NHsd (sleeping beauty) mutants (chr 13) + 5
          SS-Chr 13BN mutants + 6
          SS.BN-(D13Rat124-D13Hmgc3694)/Mcwi (CRISPR/Cas9) mutants (chr 13) 0
          SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 13) + 5
          SS/JrHsdMcwi (ZFN) mutants (chr 13) + 16
paths to the root