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RAT STRAINS - ANNOTATIONS
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The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (
http://rgd.mcw.edu/contact/index.shtml
).
Term:
F344/NHsd (sleeping beauty) mutants (chr 3)
go back to main search page
Accession:
RS:0002743
browse the term
show annotations for term's descendants Sort by:
symbol
object name
position
reference
evidence
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Rat (40)
Mouse (0)
Human (0)
Chinchilla (0)
Bonobo (0)
Dog (0)
Squirrel (0)
Pig (0)
Green Monkey (0)
Naked Mole-rat (0)
All
Strains (40)
F344-AcoxlTn(sb-T2/Bart3)2.342Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Acoxl
Tn(sb-T2/Bart3)2.342Mcwi
IEA
RGD
NCBI chr 3:115,061,069...115,367,032
F344-AdaTn(sb-T2/Bart3)2.237Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Ada
Tn(sb-T2/Bart3)2.237Mcwi
IEA
RGD
NCBI chr 3:152,398,745...152,422,854
F344-Ano3Tn(sb-T2/Bart3)2.307Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Ano3
Tn(sb-T2/Bart3)2.307Mcwi
IEA
RGD
NCBI chr 3:97,235,671...97,550,090
F344-AW915325Tn(sb-T2/Bart3)2.319Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-AW915325
Tn(sb-T2/Bart3)2.319Mcwi
IEA
RGD
F344-AW921689Tn(sb-T2/Bart3)2.209Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
AW921689
Tn(sb-T2/Bart3)2.209Mcwi
IEA
RGD
F344-BE329202Tn(sb-T2/Bart3)2.198Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BE329202
Tn(sb-T2/Bart3)2.198Mcwi
IEA
RGD
F344-BF522453Tn(sb-T2/Bart3)2.166Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BF522453
Tn(sb-T2/Bart3)2.166Mcwi
IEA
RGD
F344-BI284934Tn(sb-T2/Bart3)2.185Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI284934
Tn(sb-T2/Bart3)2.185Mcwi
IEA
RGD
F344-BI284938Tn(sb-T2/Bart3)2.155Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI284938
Tn(sb-T2/Bart3)2.155Mcwi
IEA
RGD
F344-BI284938Tn(sb-T2/Bart3)2.187Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI284938
Tn(sb-T2/Bart3)2.187Mcwi
IEA
RGD
F344-BI285110Tn(sb-T2/Bart3)2.167Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI285110
Tn(sb-T2/Bart3)2.167Mcwi
IEA
RGD
F344-BI285226Tn(sb-T2/Bart3)2.193Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI285226
Tn(sb-T2/Bart3)2.193Mcwi
IEA
RGD
F344-BI285226Tn(sb-T2/Bart3)2.194Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BI285226
Tn(sb-T2/Bart3)2.194Mcwi
IEA
RGD
F344-BQ195794Tn(sb-T2/Bart3)2.182Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
BQ195794
Tn(sb-T2/Bart3)2.182Mcwi
IEA
RGD
F344-CA338503Tn(sb-T2/Bart3)2.168Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
CA338503
Tn(sb-T2/Bart3)2.168Mcwi
IEA
RGD
F344-CA338503Tn(sb-T2/Bart3)2.175Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
CA338503
Tn(sb-T2/Bart3)2.175Mcwi
IEA
RGD
F344-CA338503Tn(sb-T2/Bart3)2.196Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
CA338503
Tn(sb-T2/Bart3)2.196Mcwi
IEA
RGD
F344-CB706876Tn(sb-T2/Bart3)2.181Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
CB706876
Tn(sb-T2/Bart3)2.181Mcwi
IEA
RGD
F344-Cst3Tn(sb-T2/Bart3)2.172Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Cst3
Tn(sb-T2/Bart3)2.172Mcwi
IEA
RGD
NCBI chr 3:136,336,923...136,340,796
F344-CyssTn(sb-T2/Bart3)2.173Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Cyss
Tn(sb-T2/Bart3)2.173Mcwi
IEA
RGD
NCBI chr 3:137,432,049...137,436,654
F344-Entpd6Tn(sb-T2/Bart3)2.174Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Entpd6
Tn(sb-T2/Bart3)2.174Mcwi
IEA
RGD
NCBI chr 3:139,575,659...139,598,163
F344-Immp1lTn(sb-T2/Bart3)2.246Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Immp1l
Tn(sb-T2/Bart3)2.246Mcwi
IEA
RGD
NCBI chr 3:92,385,329...92,449,559
F344-Kcnh7Tn(sb-T2/Bart3)2.295Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Kcnh7
Tn(sb-T2/Bart3)2.295Mcwi
IEA
RGD
NCBI chr 3:47,329,338...47,822,122
F344-Kif16bTn(sb-T2/Bart3)2.200Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Kif16b
Tn(sb-T2/Bart3)2.200Mcwi
IEA
RGD
NCBI chr 3:129,974,692...130,254,194
F344-LOC681893Tn(sb-T2/Bart3)2.159Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
LOC681893
Tn(sb-T2/Bart3)2.159Mcwi
IEA
RGD
F344-LOC681893Tn(sb-T2/Bart3)2.161Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
LOC681893
Tn(sb-T2/Bart3)2.161Mcwi
IEA
RGD
F344-Lrrc4cTn(sb-T2/Bart3)2.224Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Lrrc4c
Tn(sb-T2/Bart3)2.224Mcwi
IEA
RGD
NCBI chr 3:82,305,495...83,684,039
F344-Lrrc4cTn(sb-T2/Bart3)2.254Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Lrrc4c
Tn(sb-T2/Bart3)2.254Mcwi
IEA
RGD
NCBI chr 3:82,305,495...83,684,039
F344-NapbTn(sb-T2/Bart3)2.162Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Napb
Tn(sb-T2/Bart3)2.162Mcwi
IEA
RGD
NCBI chr 3:136,132,248...136,179,280
F344-Prr5lTn(sb-T2/Bart3)2.228Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Prr5l
Tn(sb-T2/Bart3)2.228Mcwi
IEA
RGD
NCBI chr 3:88,001,951...88,173,532
F344-PtpraTn(sb-T2/Bart3)2.261Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Ptpra
Tn(sb-T2/Bart3)2.261Mcwi
IEA
RGD
NCBI chr 3:117,650,146...117,759,744
F344-Rapgef4Tn(sb-T2/Bart3)2.314Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Rapgef4
Tn(sb-T2/Bart3)2.314Mcwi
IEA
RGD
NCBI chr 3:56,809,388...57,101,332
F344-RGD1311344Tn(sb-T2/Bart3)2.164Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Dzank1
Tn(sb-T2/Bart3)2.164Mcwi
IEA
RGD
NCBI chr 3:131,855,890...131,908,217
F344-RGD1564304Tn(sb-T2/Bart3)2.201Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
RGD1564304
Tn(sb-T2/Bart3)2.201Mcwi
IEA
RGD
F344-Slc24a3Tn(sb-T2/Bart3)2.178Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Slc24a3
Tn(sb-T2/Bart3)2.178Mcwi
IEA
RGD
NCBI chr 3:132,552,119...133,051,192
F344-Slc24a3Tn(sb-T2/Bart3)2.188Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Slc24a3
Tn(sb-T2/Bart3)2.188Mcwi
IEA
RGD
NCBI chr 3:132,552,119...133,051,192
F344-SnphTn(sb-T2/Bart3)2.214Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Snph
Tn(sb-T2/Bart3)2.214Mcwi
IEA
RGD
NCBI chr 3:140,098,540...140,139,342
F344-Sptlc3Tn(sb-T2/Bart3)2.147Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Sptlc3
Tn(sb-T2/Bart3)2.147Mcwi
IEA
RGD
NCBI chr 3:126,847,878...126,978,010
F344-Syndig1Tn(sb-T2/Bart3)2.171Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Syndig1
Tn(sb-T2/Bart3)2.171Mcwi
IEA
RGD
NCBI chr 3:138,030,995...138,234,646
F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
F344-
Tasp1
Tn(sb-T2/Bart3)2.219Mcwi
IEA
RGD
NCBI chr 3:127,176,416...127,408,039
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
rat strain
6622
chromosome altered
2397
chromosome 3
187
chromosome 3 mutant
80
F344 mutants (chr 3)
48
F344/NHsd (sleeping beauty) mutants (chr 3)
40
F344-AW915325Tn(sb-T2/Bart3)2.319Mcwi
1
F344-AW921689Tn(sb-T2/Bart3)2.209Mcwi
1
F344-AcoxlTn(sb-T2/Bart3)2.342Mcwi
1
F344-AdaTn(sb-T2/Bart3)2.237Mcwi
1
F344-Ano3Tn(sb-T2/Bart3)2.307Mcwi
1
F344-BE329202Tn(sb-T2/Bart3)2.198Mcwi
1
F344-BF522453Tn(sb-T2/Bart3)2.166Mcwi
1
F344-BI284934Tn(sb-T2/Bart3)2.185Mcwi
1
F344-BI284938Tn(sb-T2/Bart3)2.155Mcwi
1
F344-BI284938Tn(sb-T2/Bart3)2.187Mcwi
1
F344-BI285110Tn(sb-T2/Bart3)2.167Mcwi
1
F344-BI285226Tn(sb-T2/Bart3)2.193Mcwi
1
F344-BI285226Tn(sb-T2/Bart3)2.194Mcwi
1
F344-BQ195794Tn(sb-T2/Bart3)2.182Mcwi
1
F344-CA338503Tn(sb-T2/Bart3)2.168Mcwi
1
F344-CA338503Tn(sb-T2/Bart3)2.175Mcwi
1
F344-CA338503Tn(sb-T2/Bart3)2.196Mcwi
1
F344-CB706876Tn(sb-T2/Bart3)2.181Mcwi
1
F344-Cst3Tn(sb-T2/Bart3)2.172Mcwi
1
F344-CyssTn(sb-T2/Bart3)2.173Mcwi
1
F344-Entpd6Tn(sb-T2/Bart3)2.174Mcwi
1
F344-Immp1lTn(sb-T2/Bart3)2.246Mcwi
1
F344-Kcnh7Tn(sb-T2/Bart3)2.295Mcwi
1
F344-Kif16bTn(sb-T2/Bart3)2.200Mcwi
1
F344-LOC681893Tn(sb-T2/Bart3)2.159Mcwi
1
F344-LOC681893Tn(sb-T2/Bart3)2.161Mcwi
1
F344-Lrrc4cTn(sb-T2/Bart3)2.224Mcwi
1
F344-Lrrc4cTn(sb-T2/Bart3)2.254Mcwi
1
F344-NapbTn(sb-T2/Bart3)2.162Mcwi
1
F344-Prr5lTn(sb-T2/Bart3)2.228Mcwi
1
F344-PtpraTn(sb-T2/Bart3)2.261Mcwi
1
F344-RGD1311344Tn(sb-T2/Bart3)2.164Mcwi
1
F344-RGD1564304Tn(sb-T2/Bart3)2.201Mcwi
1
F344-Rapgef4Tn(sb-T2/Bart3)2.314Mcwi
1
F344-Slc24a3Tn(sb-T2/Bart3)2.178Mcwi
1
F344-Slc24a3Tn(sb-T2/Bart3)2.188Mcwi
1
F344-SnphTn(sb-T2/Bart3)2.214Mcwi
1
F344-Sptlc3Tn(sb-T2/Bart3)2.147Mcwi
1
F344-Syndig1Tn(sb-T2/Bart3)2.171Mcwi
1
F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi
1